| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1064 |
|---|
| Symbol | |
|---|
| ID | 4481351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1302683 |
|---|
| End bp | 1303780 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721812 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_864988 |
|---|
| Protein GI | 117924371 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.468822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.968223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC GCTACGGCAT TGACAGCCAT AAACTCAGCT ACCACCCCCT ACGGGTGGCG
CAACTCTTGA CCGGTCAAAA CCAGTGGGAA ACGGCCAAAT CCATCTACCC CATCTATATG
GAGATCTCCC CCATGGGGGC GTGCAACCAT CGCTGCACCT TTTGCGCGGT GGACTATATT
GGCTATAACA GCGCCAACAA GCTGGATGCC GATATGATGA AAGCCCGCCT GCCACAAATG
GGGGCGTTGG GCATTAAATC CATCATGTAC GCCGGGGAGG GGGAACCCCT CTTACACAAG
CGCATCAGCG AGATCTTGCT GGATACCAAA GCCGCCGGTA TCGACACCGC CTTAACCACC
AACGCCACCG TGTTGCCGAT GGATTTTTTG GATAAAGCAC TGCCTACCCT CTCCTGGATC
AAGGCATCCA TCAATGCGGG CAGTGCGGAA AACTATGCGC AGATCCACCA GACCAAAGCG
GCGGATTTTA ATAAGGTGGT GGAGAACCTC AAGGCCATGG TAGCGGCCAG ACGGGCGGGA
GGATATGGGG TTACATTGGG GGCACAAGCG CTGCTGCTGC CGGAAAATGC CCATGAAATG
GCCCAACTGG GGCGCCTCTG CCGGGATGAG ATTGGGCTGG ACTATCTGGT GGTCAAGCCC
TATTCCCAAC ATATGTTTAG CGAAACCCGC CGTTATGCTG GGCTCGACTA CCAGGCTTTA
ATGGATCTGG AAGCCCCCTT GGCGGAGCTA AACAGTGCGC AGTTTCAGCT TATTTTTCGC
CGCGCGACCA TGCAAAAGTA TCGCGATGAA AACCGCTACA CCCAATGCAA AGCCACCCCC
TATCTATGGG CCTATGTCAT GGCCGATGGC ACCGTCTCTG GCTGTAGCGC CTTTTTGTTG
GATAAGCATT TTGAGTATGG CAACCTCAAT GAGCATGACT TTAAAACCAT TTGGGAAGGG
GAAAAACGTC ATGCTGGTTG GCACTATGTG CGGGAGTCGC TGGATATCAG CCAGTGCCGC
AGCAACTGCC GCATGGATGC CGTCAACCGC TATCTGCATC AGTTGGAGCA AGGGGTGCCC
CACATTAACT TTATTTAA
|
|---|
| Protein sequence | MADRYGIDSH KLSYHPLRVA QLLTGQNQWE TAKSIYPIYM EISPMGACNH RCTFCAVDYI
GYNSANKLDA DMMKARLPQM GALGIKSIMY AGEGEPLLHK RISEILLDTK AAGIDTALTT
NATVLPMDFL DKALPTLSWI KASINAGSAE NYAQIHQTKA ADFNKVVENL KAMVAARRAG
GYGVTLGAQA LLLPENAHEM AQLGRLCRDE IGLDYLVVKP YSQHMFSETR RYAGLDYQAL
MDLEAPLAEL NSAQFQLIFR RATMQKYRDE NRYTQCKATP YLWAYVMADG TVSGCSAFLL
DKHFEYGNLN EHDFKTIWEG EKRHAGWHYV RESLDISQCR SNCRMDAVNR YLHQLEQGVP
HINFI
|
|---|
| |