Gene Mmc1_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1059 
Symbol 
ID4482298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1297153 
End bp1297986 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID639721807 
Producttransketolase subunit A 
Protein accessionYP_864983 
Protein GI117924366 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.579948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG CCATTGAACG CCCCCACTTT GACACCCCTG TGCTGGATGA CCGCGCCCGT 
CATCTACGGC GGCTGGTACT GCGTGCCTTG GACAAGGGAG GTCGTGGCCA CCCTGGTTCT
GCCATGTCGC TGATGGAGCT GCTGCGGGTG CTTTACGACG ATGTGCTCAA TATCGACCCC
CACAATCCCC TGTGGCAAGA TCGGGACCGT TGCATCCTCT CCAAGGGGCA TGGCTGTTTG
GCCCTCTATG CCCTGCTGGC CGACAAAGGG TTTTTTCCCG TTGCAGAGCT GGATCGCTTT
TGCCAGCTGG AGAGTCGCTT GGGGGGACAT CCAGAACGGC ATGTTCTGCC TGGGGTGGAA
GCCTCCACGG GGGCCTTGGG GCATGGTCTC TCCCTGGCGG CGGGCATGGC CCTAGCCGCC
AAGTTAAAGG GGGCAAGCTG GCGGGTCTTT GCCTTAATGG GGGATGGTGA GATCAATGAG
GGCTCGGTAT GGGAGGCCGC CCTGTTTGCC GCCAAACACC AGCTCAACAA TCTGGTGGCG
GTGATCGACT ATAACAAGTT GCAATCCTAC GGCCCCATCT CTGCGGTGCA GGGGTTGGAG
CCGCTGGCGG ATAAGTGGCG CGCCTTCGGT TTTGGCGTGC AGGAGGTGGA TGGGCACGAT
GTGGGCGCAC TGCGACACTG CTTTACCCAG CTCACGCCGG ACCAGCCCAA TCTGGTGATT
GCCCATACGG TAAAGGGCAA GGGTATTCCC GAGGCCGAGG ATAACCCCAG TTGGCACCAT
AAATCCTCCC TCAAACCCGC TGAAATGGAA AGCCTCTACC AAGCGCTGGC CTAA
 
Protein sequence
MRAAIERPHF DTPVLDDRAR HLRRLVLRAL DKGGRGHPGS AMSLMELLRV LYDDVLNIDP 
HNPLWQDRDR CILSKGHGCL ALYALLADKG FFPVAELDRF CQLESRLGGH PERHVLPGVE
ASTGALGHGL SLAAGMALAA KLKGASWRVF ALMGDGEINE GSVWEAALFA AKHQLNNLVA
VIDYNKLQSY GPISAVQGLE PLADKWRAFG FGVQEVDGHD VGALRHCFTQ LTPDQPNLVI
AHTVKGKGIP EAEDNPSWHH KSSLKPAEME SLYQALA