Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1059 |
Symbol | |
ID | 4482298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1297153 |
End bp | 1297986 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639721807 |
Product | transketolase subunit A |
Protein accession | YP_864983 |
Protein GI | 117924366 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.579948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCG CCATTGAACG CCCCCACTTT GACACCCCTG TGCTGGATGA CCGCGCCCGT CATCTACGGC GGCTGGTACT GCGTGCCTTG GACAAGGGAG GTCGTGGCCA CCCTGGTTCT GCCATGTCGC TGATGGAGCT GCTGCGGGTG CTTTACGACG ATGTGCTCAA TATCGACCCC CACAATCCCC TGTGGCAAGA TCGGGACCGT TGCATCCTCT CCAAGGGGCA TGGCTGTTTG GCCCTCTATG CCCTGCTGGC CGACAAAGGG TTTTTTCCCG TTGCAGAGCT GGATCGCTTT TGCCAGCTGG AGAGTCGCTT GGGGGGACAT CCAGAACGGC ATGTTCTGCC TGGGGTGGAA GCCTCCACGG GGGCCTTGGG GCATGGTCTC TCCCTGGCGG CGGGCATGGC CCTAGCCGCC AAGTTAAAGG GGGCAAGCTG GCGGGTCTTT GCCTTAATGG GGGATGGTGA GATCAATGAG GGCTCGGTAT GGGAGGCCGC CCTGTTTGCC GCCAAACACC AGCTCAACAA TCTGGTGGCG GTGATCGACT ATAACAAGTT GCAATCCTAC GGCCCCATCT CTGCGGTGCA GGGGTTGGAG CCGCTGGCGG ATAAGTGGCG CGCCTTCGGT TTTGGCGTGC AGGAGGTGGA TGGGCACGAT GTGGGCGCAC TGCGACACTG CTTTACCCAG CTCACGCCGG ACCAGCCCAA TCTGGTGATT GCCCATACGG TAAAGGGCAA GGGTATTCCC GAGGCCGAGG ATAACCCCAG TTGGCACCAT AAATCCTCCC TCAAACCCGC TGAAATGGAA AGCCTCTACC AAGCGCTGGC CTAA
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Protein sequence | MRAAIERPHF DTPVLDDRAR HLRRLVLRAL DKGGRGHPGS AMSLMELLRV LYDDVLNIDP HNPLWQDRDR CILSKGHGCL ALYALLADKG FFPVAELDRF CQLESRLGGH PERHVLPGVE ASTGALGHGL SLAAGMALAA KLKGASWRVF ALMGDGEINE GSVWEAALFA AKHQLNNLVA VIDYNKLQSY GPISAVQGLE PLADKWRAFG FGVQEVDGHD VGALRHCFTQ LTPDQPNLVI AHTVKGKGIP EAEDNPSWHH KSSLKPAEME SLYQALA
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