Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1055 |
Symbol | |
ID | 4482294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1293325 |
End bp | 1294230 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639721803 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_864979 |
Protein GI | 117924362 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00148895 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.81514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATGG CACGTTTTCT CATCATCGGT GCATCGGGCT TTATCGGCCA ACATTTGCTG CGGCAGCTAG GCCCGGAGCA GTGTTTGGGT ACCTACGCCC ACACTCCCTT TGACGGCGGC ATCCATTTTG ACCCGACCCT CATTGATCCT GACCAGTTTT TGGATCTCTA CGGCCATGTG GAACAGATCT ATCTGTTAAT GGCGGTGAGC AGCTTGATCA CCTGTGCCAA CGACCCTCAA GGCAGCTACG CCATTAATGT CGAGGCCTCT AAGGCCATTG CCCTTTGGTG CAAAAAGCAT CAAATCCCCC TGCTGTTTAC CTCCAGCGAT GCGGTGTTTG GGGGGCAACA GGGGCTCTAT GACGAGCAGC ACATCCCCAC CCCCCTTGTG ACTTATGGCA AACAGAAGCG CGAGGTTGAG GTTTTTCTCC AAGCGCACCT TCCCCATTTA CACACCACCG TGCGGCTCTC AAAAACCTAC AGCAGCAACC CCCAGGACAA AACCTTGTTG TCAGCATGGG TGCGGGCTTG GCAGCAGCAG CAGCCCATTA TGTGCGCCAC CGACCAGCGT TTTAACCCCA TCCATGTGGA AGATGCGGTG GTGGGCATGC AGCAATTGAT GGCGGGCCAG CACCGGGGCC TTTACCACCT TTGTGGCCCT ACCCCGGTAG ACCGCTACCA GCTGCTGCTG GATCTGCAAG AGTGCTATGA ACAGCAGCTA GGCCCCCTGC CCAGTTGGCA GGTAAAAGCT TGTCTTATCA ATGAACTTGG CCTCGCGGAA ACCTGGCCCA TTGATATTTC CACCCGTATT GACAAATTGC TGGCGACCAT CCCCCTACAC CCCCGCACCC CACAACAGGG TTGCCAACAG TTGATCCAAG CCATCGTGGC GGAGCGTTCC TGTTAA
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Protein sequence | MAMARFLIIG ASGFIGQHLL RQLGPEQCLG TYAHTPFDGG IHFDPTLIDP DQFLDLYGHV EQIYLLMAVS SLITCANDPQ GSYAINVEAS KAIALWCKKH QIPLLFTSSD AVFGGQQGLY DEQHIPTPLV TYGKQKREVE VFLQAHLPHL HTTVRLSKTY SSNPQDKTLL SAWVRAWQQQ QPIMCATDQR FNPIHVEDAV VGMQQLMAGQ HRGLYHLCGP TPVDRYQLLL DLQECYEQQL GPLPSWQVKA CLINELGLAE TWPIDISTRI DKLLATIPLH PRTPQQGCQQ LIQAIVAERS C
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