Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1049 |
Symbol | |
ID | 4482288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1287976 |
End bp | 1288860 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721797 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_864973 |
Protein GI | 117924356 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTAA AACCCTACCT TGCGGATCGT AAATACTTGG TCGAGAGCGC CCTTGACCGG CTACTACCCG CCGCCGACCG AGAGCCCAGA GCCTTGACCG GGGCTATGCG CTATAGCCTG CTCATCGGCG GTAAGCGGCT GCGACCCATC CTAACCCTAG CCTGCTGCGA AGCCGTTGGG GGAGCCCTAG AGCGCGCAAT GAACTTTGCC TGCGCCATGG AGTGTGTGCA TACCTACTCC CTTATTCATG ATGACCTACC GGCCATGGAT AATGACGATC TACGCCGAGG TCACCCCACC TGTCACCGGC AATATGGTGA AGCCACCGCC ATTTTGGCTG GCGATGCCCT GCTTACCCAT GCCTTTGAGC TGGCCGCCAA GCCGGTCACA GGGGTATTGC CCGAGGCACG CCTAGAGCTG ATTGGCGAAC TGGCGATGGC AGCGGGAACC TATGGTATGG TGGGGGGGCA AATGCTGGAC ATCCAGGGGG AGAAACGCCC CTTGGAACTG GTGCAGTTGC AAAACATCCA TATCCATAAA ACTGGCGCCC TCATCCGGGT TGCCTGTCTG GCCGGTGCCC GCTTGGGTGG GGGAACCCCC GATCAAGTTA AACACCTTAA ACGCTATGGC GAGGCGTTGG GGCTGGCGTT TCAAATCACC GATGATATTC TCGATGAGGT TGGAGACACC AAAACCCTGG GTAAAGCCAC CGGCGTGGAT CGCGCTTTGG ATAAAGCCAC CTACCCCAAA CTCATGGGGC TGGCCCAGGC CCGCGAGGCG GCTGAAAATC TTATGCAAGA GGCGACCCGC TGCCTAACCG AGTTCGGCCC GCAAGCCGAT CCTCTGCGCG CACTGGCGCA GTATGTCATC GCCCGCACCC ATTAA
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Protein sequence | MELKPYLADR KYLVESALDR LLPAADREPR ALTGAMRYSL LIGGKRLRPI LTLACCEAVG GALERAMNFA CAMECVHTYS LIHDDLPAMD NDDLRRGHPT CHRQYGEATA ILAGDALLTH AFELAAKPVT GVLPEARLEL IGELAMAAGT YGMVGGQMLD IQGEKRPLEL VQLQNIHIHK TGALIRVACL AGARLGGGTP DQVKHLKRYG EALGLAFQIT DDILDEVGDT KTLGKATGVD RALDKATYPK LMGLAQAREA AENLMQEATR CLTEFGPQAD PLRALAQYVI ARTH
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