Gene Mmc1_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1049 
Symbol 
ID4482288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1287976 
End bp1288860 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content59% 
IMG OID639721797 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_864973 
Protein GI117924356 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTAA AACCCTACCT TGCGGATCGT AAATACTTGG TCGAGAGCGC CCTTGACCGG 
CTACTACCCG CCGCCGACCG AGAGCCCAGA GCCTTGACCG GGGCTATGCG CTATAGCCTG
CTCATCGGCG GTAAGCGGCT GCGACCCATC CTAACCCTAG CCTGCTGCGA AGCCGTTGGG
GGAGCCCTAG AGCGCGCAAT GAACTTTGCC TGCGCCATGG AGTGTGTGCA TACCTACTCC
CTTATTCATG ATGACCTACC GGCCATGGAT AATGACGATC TACGCCGAGG TCACCCCACC
TGTCACCGGC AATATGGTGA AGCCACCGCC ATTTTGGCTG GCGATGCCCT GCTTACCCAT
GCCTTTGAGC TGGCCGCCAA GCCGGTCACA GGGGTATTGC CCGAGGCACG CCTAGAGCTG
ATTGGCGAAC TGGCGATGGC AGCGGGAACC TATGGTATGG TGGGGGGGCA AATGCTGGAC
ATCCAGGGGG AGAAACGCCC CTTGGAACTG GTGCAGTTGC AAAACATCCA TATCCATAAA
ACTGGCGCCC TCATCCGGGT TGCCTGTCTG GCCGGTGCCC GCTTGGGTGG GGGAACCCCC
GATCAAGTTA AACACCTTAA ACGCTATGGC GAGGCGTTGG GGCTGGCGTT TCAAATCACC
GATGATATTC TCGATGAGGT TGGAGACACC AAAACCCTGG GTAAAGCCAC CGGCGTGGAT
CGCGCTTTGG ATAAAGCCAC CTACCCCAAA CTCATGGGGC TGGCCCAGGC CCGCGAGGCG
GCTGAAAATC TTATGCAAGA GGCGACCCGC TGCCTAACCG AGTTCGGCCC GCAAGCCGAT
CCTCTGCGCG CACTGGCGCA GTATGTCATC GCCCGCACCC ATTAA
 
Protein sequence
MELKPYLADR KYLVESALDR LLPAADREPR ALTGAMRYSL LIGGKRLRPI LTLACCEAVG 
GALERAMNFA CAMECVHTYS LIHDDLPAMD NDDLRRGHPT CHRQYGEATA ILAGDALLTH
AFELAAKPVT GVLPEARLEL IGELAMAAGT YGMVGGQMLD IQGEKRPLEL VQLQNIHIHK
TGALIRVACL AGARLGGGTP DQVKHLKRYG EALGLAFQIT DDILDEVGDT KTLGKATGVD
RALDKATYPK LMGLAQAREA AENLMQEATR CLTEFGPQAD PLRALAQYVI ARTH