Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1044 |
Symbol | |
ID | 4484052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1279667 |
End bp | 1280359 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721792 |
Product | exonuclease, RNase T and DNA polymerase III |
Protein accession | YP_864968 |
Protein GI | 117924351 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.69033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTTA AACGTGCCAT TATGGAGTGG CGTCGCCAGC GGTTGTGGGC TGCTTCGCAA CATGAGTTGG TGCGGGATTA TCTATCGGTC CCCATTGTGG ATGCCAAGAC CGACTATCGG GATGTAAAAT TTCTGGCGTT GGATCTGGAG ACCACGGGGC TGGATCCTAA CAAGAGTGAG ATTTTGAGTG TCGGTTTTGT GCCGGTATAC AATGGTCGTG TGGTGCTTAG CGGGTGTGCC CACTATTTGG TGCAGCCGGA GGGGGCCATT TCCCATGCAT CGGCGGTGGT GCATGGCATT ACCGACGATC ATGCCGAGGC CTATGGTGAA CCATTGTCTG TGGTGCTGCC CCGGGTGCTC AAGGCGTTGA AGGGGCATGT TTTACTGGCC CATCATTGTC CCATTGAGTT GAATTTTATA CGCAAAGCCT GTCAAAGGCT TTATGGTGAG ATGCCACTTA TTCCCGCAGT GGATACTTTG GTGATCGAGC GGCAGATTAT GGATCGTCGC AGCGGCACCT ACGAGCCTGG CGCTCTGCGC CTGTTTACGG CGCGAACCCG CTATAATCTA CCTCGCTATG CGGCCCACGA TGCCTTAATG GATGCCATCG CCTGTGGTGA GCTCTTTTTG GCTCAAGCCG TTTATCAAGC GGGCAGAGGC ACGCTCACCA TGAACCGTCT CTTTAACCGT TAA
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Protein sequence | MFFKRAIMEW RRQRLWAASQ HELVRDYLSV PIVDAKTDYR DVKFLALDLE TTGLDPNKSE ILSVGFVPVY NGRVVLSGCA HYLVQPEGAI SHASAVVHGI TDDHAEAYGE PLSVVLPRVL KALKGHVLLA HHCPIELNFI RKACQRLYGE MPLIPAVDTL VIERQIMDRR SGTYEPGALR LFTARTRYNL PRYAAHDALM DAIACGELFL AQAVYQAGRG TLTMNRLFNR
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