Gene Mmc1_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1044 
Symbol 
ID4484052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1279667 
End bp1280359 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content54% 
IMG OID639721792 
Productexonuclease, RNase T and DNA polymerase III 
Protein accessionYP_864968 
Protein GI117924351 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.69033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA AACGTGCCAT TATGGAGTGG CGTCGCCAGC GGTTGTGGGC TGCTTCGCAA 
CATGAGTTGG TGCGGGATTA TCTATCGGTC CCCATTGTGG ATGCCAAGAC CGACTATCGG
GATGTAAAAT TTCTGGCGTT GGATCTGGAG ACCACGGGGC TGGATCCTAA CAAGAGTGAG
ATTTTGAGTG TCGGTTTTGT GCCGGTATAC AATGGTCGTG TGGTGCTTAG CGGGTGTGCC
CACTATTTGG TGCAGCCGGA GGGGGCCATT TCCCATGCAT CGGCGGTGGT GCATGGCATT
ACCGACGATC ATGCCGAGGC CTATGGTGAA CCATTGTCTG TGGTGCTGCC CCGGGTGCTC
AAGGCGTTGA AGGGGCATGT TTTACTGGCC CATCATTGTC CCATTGAGTT GAATTTTATA
CGCAAAGCCT GTCAAAGGCT TTATGGTGAG ATGCCACTTA TTCCCGCAGT GGATACTTTG
GTGATCGAGC GGCAGATTAT GGATCGTCGC AGCGGCACCT ACGAGCCTGG CGCTCTGCGC
CTGTTTACGG CGCGAACCCG CTATAATCTA CCTCGCTATG CGGCCCACGA TGCCTTAATG
GATGCCATCG CCTGTGGTGA GCTCTTTTTG GCTCAAGCCG TTTATCAAGC GGGCAGAGGC
ACGCTCACCA TGAACCGTCT CTTTAACCGT TAA
 
Protein sequence
MFFKRAIMEW RRQRLWAASQ HELVRDYLSV PIVDAKTDYR DVKFLALDLE TTGLDPNKSE 
ILSVGFVPVY NGRVVLSGCA HYLVQPEGAI SHASAVVHGI TDDHAEAYGE PLSVVLPRVL
KALKGHVLLA HHCPIELNFI RKACQRLYGE MPLIPAVDTL VIERQIMDRR SGTYEPGALR
LFTARTRYNL PRYAAHDALM DAIACGELFL AQAVYQAGRG TLTMNRLFNR