| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1035 |
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| Symbol | |
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| ID | 4484043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1266002 |
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| End bp | 1269127 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721783 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_864959 |
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| Protein GI | 117924342 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.73134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACC CTTCCCGGCA GGAGCGTGAA CTGGCGCAGC GTTTTCAAAC CCTGCGCATG
GATTTCCTTG CGGAGATTCC GCCGCTCTGC CGCCATTTGG ATCGCTTGGT GGCAGAACCC
AGCGAAGGTA AGCGTCACCG CCGTTGGCAC TGTGCCCAGT GGCATGCGCG TTTGCAGGGG
GTGGTGGGCA GTTGTGCCAC CTTTGAGTGC CGTGGCTTGC GGGATCTGGC GCAGGACGCG
GGCAATCTTT TACAAAAATT GGCGCGTCAG GATGTCCCCC CACAGAGCAG CCAGCAGATG
CGCCAGGAGT TGCGTGACCT GCTGGCTGCC TTGCAAGAGA GTGCCCAGCT TAAATTAAAC
GAGCCAGAGC TGGTCTTTCT GCCCAAGGAG TACAGCCTGT TTTTGCAGGA GGAGGTGCTC
TCGCATACGG TGTTGGCCTT TTCCCATGAT GCACGTTTGT TAGAGCAGTT GGGCCGCTCT
TTAGCGAGTA AGGGCTACCG ACTGGTGCCC ATGCCCAGCT ATCGCGCCAT GCGGGATGAG
GTGGTGCGCT CCTCCGCTGC CGCAGTGTTG GTGGATCTGG AGGCGATGTC GGCGGGGGTG
GATGAGGGGG ATATTCCCGG TTTACTCTGT CAAGAGCAGC CCATGCCCAT GCCGCTGTTG
GTATTGGGGG GCAGCGATAA TATGGATCAC CGTCTCTGTG CGGTGCGTTT GGGGAGTACC
GCATTTCGGG CTCGCCCCAT CGCTGCGGAC GAGTTGGCGC GGCAGTTGAT TGCCCATCAC
CAGCGTCATA ACCACGCCCA GCGGGCGCGG GTGTTGATTA TGGATGATAA TGAACCCTTG
GGGCGCTTTT ATCAGATGTT GCTGGAGCTG GCGGAGATGG AGGTCGTCTA TATCCGTGAG
GCCGAGGAGC TGCTGCCTGC CATTCAGCGT TTTAAGCCCG AGGTGCTGTT GCTGGATCTC
TATATGCCTG ACGCCAATGG TTTGGAGATT GCGGCGGTGG TGCGGCAGAG CGATAGCAAC
GCGGATCTGC CGATTTTGCT GATGGTCGAA AATAATGCCG GGCGGCGCAT ACTGGACCAA
ACCAAGGAGA GCGAGAGCTT TTTGATCAAG CCGGTGCAGC CGGGTTTGAT GGTGCGGGCG
GTGATTGAAC GGGTGCGGCA GCGCCGCCAG ACGGTGGGCC GGGTGGAGTA TATGCGCTCG
GCGCTGCATG AGCTGGAACA GTTGCAGCTC GCGCTTAACC AACACGCCAT TGTCAGTGTC
ACCGATCAAG ATGGCAATAT TACCTTCGTA AACCAAAAAT TTTGTCAAAC CAGTGGTTAT
ACCCCCAATG AACTGATTGG CAACAACCAC CGCATGCTGA AATCGGACCA GCACCCTGCC
AGCTTTTATC AAGAGATGTG GGCGACCATT ACCCAGGGGC AGACGTGGCA CGGCCAGGTT
AAAAACCGGC GTAAAAATGG GACCACCTAT TGGGTTTCGG CCACCATTGT GCCCTTTTTG
GATGGGGATG GTACGCCTCG GGAATATATT TCGGTACGCA CCGACGTTAC TGCCCAAAAG
GCTGCCCAGG AGCGCTACCG CGCCTCGGAA CAGCGTCTGC GGGCGATTTT GGATAACACC
CATGAAGGGG TGGTGGTGAT GGAGGCCAGC GGTCAGATTG AGATGCTCAA TCCAGCGGCG
GCCCGTATTT TTGGTTATAC CTTGGCCGAC ATGCCGCAAC CAACCATCCA GTGGTTATTG
CCCGAGTTCC CTTTAACCGA CATTTTAAAT GATGCCCATC TCCACGAAGG GGGTGGGGCT
GGCGATGTTA GCCACGCCAA CCTTTATCGG GAGATGGCCG CCAACCGCTC GGACGGTTCG
CGTATGTTGT TGGGGGTCTC CGTGAGCAGC TTTCATTTGG AAGAGAGCGC GGTGTGTGTG
GCGGTGGTGC GGGATATTAC CGCCCGTAAA ATGGAGGAGA TCGAGCTTAA ACAGGCCAAA
GAGGTCGCCG AGCGGGCCAG TGCGGCCAAG ACCCGTTTTC TTTCCAGTAT GAGCCATGAG
TTGCGCACCC CCATGAACGC CATTCTGGGC TTTGCGCAGG TGATGCAGTC CGACCCCAAC
GAGCCCTTGA GTGAGTCCCA GCGAGAGTGT ACCCGTGAAA TTATTCAGGC GGGTGGGCAT
CTGCTGGAGC TGATTAACGA TGTGTTGGAT TTGGCCAAGA TCGAGGAGAA CCGTATCAGC
CTTAAAATGG CTCCGGTGCA TGTGCAAGAG GTGATTCGCG AGGCGGTGGC GTTGGTCACG
CCCATGGCGA ACCGCAAGGG TATTCGCCTC TATCATGGTA TGGGCGAGGG CGTGTGTGAG
CGGTGTGATG TGCAGGCAGA TCGCACGCGG TTAAAGCAGA TTTTGATCAA TCTTGCCACC
AACGGGGTAA AATACAACCG CGAAGGGGGC GAGGTGGAGA TAAGCTGTCG TTTGGCAGAG
GCGGGGCGTG CCCGCATTGA GGTGCGGGAT ACGGGCATTG GCATTGCCGC CTTAAAGCAG
GGGGATATTT TTGAGCCGTT TCACCGTTTG GTGGAAGATG GCACCATTGA GGGGACCGGC
ATCGGTCTTT CCATCGTTAA GCGGTTGGTC GAAGCCATGG GGGGCACGTT GGGTTTGGAG
AGTCAGGAGG GGCAAGGCAG CCGTTTTTGG TTCCAGCTAC CCAACAGTGG GATCTGTTCT
CCAACCAAGC CACACGCCTC GCTGGTGGAG CCTGTGTCGG TGCGCCAAGT GGTGCTCTAT
GTGGAAAGCA ACCCGGTGGA TCTGCAATTG ATGTCGGTGT TGATGCGCCG TTATGAACAT
TTGCGTCTGG ATGCGGTGCG TGATCTGGAG GTCGCTCAGG CGCAACTGCA ACAAGGCGAG
GTGGATCTGT TATTAATCAA TATTGGTGGT GGGGTGGAGC GTTGTGCCCC GCTGTTTGCG
TGGATGCAGC AAACGCCGCA TCTTAAAGCA CTGCCGGTGA TTGCCATCAG CGCGGATGAT
GAGGTAGAGA GCGGGGTGCG GAATCTGCCC GGTTCACCCC GTTTTATGCA AAAGCCCCTG
GATCTGGAGC CGTTGATTGC CCATATCGGG CTGCTGTTGG AGAAGCCGCA AGCGAGAGAG
GCCTAG
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| Protein sequence | MSHPSRQERE LAQRFQTLRM DFLAEIPPLC RHLDRLVAEP SEGKRHRRWH CAQWHARLQG
VVGSCATFEC RGLRDLAQDA GNLLQKLARQ DVPPQSSQQM RQELRDLLAA LQESAQLKLN
EPELVFLPKE YSLFLQEEVL SHTVLAFSHD ARLLEQLGRS LASKGYRLVP MPSYRAMRDE
VVRSSAAAVL VDLEAMSAGV DEGDIPGLLC QEQPMPMPLL VLGGSDNMDH RLCAVRLGST
AFRARPIAAD ELARQLIAHH QRHNHAQRAR VLIMDDNEPL GRFYQMLLEL AEMEVVYIRE
AEELLPAIQR FKPEVLLLDL YMPDANGLEI AAVVRQSDSN ADLPILLMVE NNAGRRILDQ
TKESESFLIK PVQPGLMVRA VIERVRQRRQ TVGRVEYMRS ALHELEQLQL ALNQHAIVSV
TDQDGNITFV NQKFCQTSGY TPNELIGNNH RMLKSDQHPA SFYQEMWATI TQGQTWHGQV
KNRRKNGTTY WVSATIVPFL DGDGTPREYI SVRTDVTAQK AAQERYRASE QRLRAILDNT
HEGVVVMEAS GQIEMLNPAA ARIFGYTLAD MPQPTIQWLL PEFPLTDILN DAHLHEGGGA
GDVSHANLYR EMAANRSDGS RMLLGVSVSS FHLEESAVCV AVVRDITARK MEEIELKQAK
EVAERASAAK TRFLSSMSHE LRTPMNAILG FAQVMQSDPN EPLSESQREC TREIIQAGGH
LLELINDVLD LAKIEENRIS LKMAPVHVQE VIREAVALVT PMANRKGIRL YHGMGEGVCE
RCDVQADRTR LKQILINLAT NGVKYNREGG EVEISCRLAE AGRARIEVRD TGIGIAALKQ
GDIFEPFHRL VEDGTIEGTG IGLSIVKRLV EAMGGTLGLE SQEGQGSRFW FQLPNSGICS
PTKPHASLVE PVSVRQVVLY VESNPVDLQL MSVLMRRYEH LRLDAVRDLE VAQAQLQQGE
VDLLLINIGG GVERCAPLFA WMQQTPHLKA LPVIAISADD EVESGVRNLP GSPRFMQKPL
DLEPLIAHIG LLLEKPQARE A
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