| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1022 |
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| Symbol | |
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| ID | 4482343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1254336 |
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| End bp | 1255103 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721770 |
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| Product | ABC transporter related |
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| Protein accession | YP_864946 |
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| Protein GI | 117924329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.216915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.173863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTT TTAACACCAG TCACCGGCCC GATAATCTTA TCCTCTATCT GGATGCGGTC
TCCGTGAGTT TTGATGGGTT TAAGGCGCTG AACGCCCTAA GCTTTTATGT GGGGCGGGGG
GAGCTGCGCG CCATTATTGG ACCCAATGGT GCGGGTAAAA CCACCATGAT GGATGTGGTC
ACCGGCAAAA CCCGTCCCGA TGTGGGCTCG GTGGTGTTTG GGGATCGGGT GGACCTAACC
AAATTGGATG AGGCGGAGAT TGCCAACCTA GGCATCGGGC GTAAATTTCA AAAACCCACG
GTGTTTGAAA ACCAGACGGT GTTTGAAAAC CTGGAGCTGG CGTTGGCGGG GGATCGGAGT
ATTTGGGCCT CGCTCTTTTT CCGGCTCAAT GGGGCGCAGC GGCAGCGTAT TCAACAGGTG
TTGGCGCTCA TTCGTCTGCA CGAGCGGCGG GATTGGTTGG CGGGCAATCT CTCCCACGGG
CAGAAGCAGT GGTTGGAGAT CGGCATGCTG TTGATGCAAG ATCCCCAGCT ATTGCTGGTG
GATGAGCCTG CGGCGGGCAT GACCGATGAA GAGACCATGC GCACGGCGCA GATGCTCAAA
GAGATTGCCA AAGATCACTC GGTGGTGGTG GTTGAGCATG ACATGGCGTT TGTAAAAAGC
TTGCAGTGTC GGGTGACGGT GTTGCATGAA GGTTCGGTGT TGGCCGAAGG ATCACTGGAG
ACGGTGCAGG CCAATGAACA GGTTATTGAG GTCTATCTGG GACGTTAA
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| Protein sequence | MSVFNTSHRP DNLILYLDAV SVSFDGFKAL NALSFYVGRG ELRAIIGPNG AGKTTMMDVV
TGKTRPDVGS VVFGDRVDLT KLDEAEIANL GIGRKFQKPT VFENQTVFEN LELALAGDRS
IWASLFFRLN GAQRQRIQQV LALIRLHERR DWLAGNLSHG QKQWLEIGML LMQDPQLLLV
DEPAAGMTDE ETMRTAQMLK EIAKDHSVVV VEHDMAFVKS LQCRVTVLHE GSVLAEGSLE
TVQANEQVIE VYLGR
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