| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1021 |
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| Symbol | |
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| ID | 4482342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1253185 |
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| End bp | 1254339 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721769 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_864945 |
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| Protein GI | 117924328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.744628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.313599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACCTA TAAGCAAGCG CATCGGGTTT TTGTTGGGGG ATCGTGGGGG GATGGCTCTG
CTGGTGTTGG TATTGGGGGC GGCCATTGTG GTGCCCATCC TTAACCTGGC GGTGGCGCCA
GAGAGCCCCT ATCACATCCC CAACTATGTG GTCAGTTTAA TGGGGAAATA TCTAGCTTTT
GCGCTGTTGG CGCTGTCGGC GGATCTGATC TGGGGCTATG CGGGCATTTT AAGTTTGGGG
CATGGTGCTT TTTTTGCCCT GGGTGGCTAT GCCATGGGCA TGTACCTTAT GCGGCAGATT
GGGGATCGAG GGGTCTATGG CAACCCAGAG CTGCCGGATT TTATGGTCTT TCTCAACTGG
CACGAGTTGC CCTGGTATTG GCACGGTTTT GAGTGGTTTG CCTTTGCCGC GCTGATGGTC
CTGGTGGTGC CGGGGCTGTT GGCCTTGGTA TTTGGTTGGT TTGCCTTTCG CAGCCGGGTT
ACGGGGGTCT ATCTCTCCAT CATTACCCAG GCGATGACCT ATGCGCTGCT GCTGGCGTTT
TTCCGGAATG ATATGGGCTT TGGTGGCAAC AATGGTTTGA CCGACTTTAA AGATCTGCTG
GGTTTTGACC TGCATGACGA TACCACCCGT GCGGCGCTGT TTAGTGTCAC GGCGCTCGCT
TTGGCCCTGA GTTATGGGGT GTGCCGATAC ATCACCGCCT CCAAACTGGG GCGGGTGCTG
TTGGCGGTGC GGGATGCCGA AAGCCGTACC CGTTTTATGG GGTATCGAGT CGAAAACTAT
AAACTGTTTG TGTTTGTGGT GGCGGCCATG ATGGCCGGTT TGGCCGGGGC GTTGTATGTG
CCCCAGGTGG GCATCATCAA CCCTGGCGAG TTTTCGCCAG GGAACTCCAT TGAGATTATT
ATCTGGGTAG CGGTCGGGGG GCGCGGCACC CTGTATGGGG CGGTGCTGGG GGCTGTTTTG
GTCAACTATG GCAAAACCTA CTTTACCGGT GCCCTGCCCG AGGCGTGGCT CTACATGTTA
GGCGCTCTGT TTGTGGCGGT GACCCTGTTT ATGCCCCAGG GGGTGGTGGG GTTGGTGGCC
CAGTGGAAGA ACCGGCTACG GGCTCGCAAA GCCCCGGCCC AGGGGGATCA TCAGGTGGCG
GAGGTGGGCC AATGA
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| Protein sequence | MGPISKRIGF LLGDRGGMAL LVLVLGAAIV VPILNLAVAP ESPYHIPNYV VSLMGKYLAF
ALLALSADLI WGYAGILSLG HGAFFALGGY AMGMYLMRQI GDRGVYGNPE LPDFMVFLNW
HELPWYWHGF EWFAFAALMV LVVPGLLALV FGWFAFRSRV TGVYLSIITQ AMTYALLLAF
FRNDMGFGGN NGLTDFKDLL GFDLHDDTTR AALFSVTALA LALSYGVCRY ITASKLGRVL
LAVRDAESRT RFMGYRVENY KLFVFVVAAM MAGLAGALYV PQVGIINPGE FSPGNSIEII
IWVAVGGRGT LYGAVLGAVL VNYGKTYFTG ALPEAWLYML GALFVAVTLF MPQGVVGLVA
QWKNRLRARK APAQGDHQVA EVGQ
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