| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1007 |
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| Symbol | |
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| ID | 4481172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1238153 |
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| End bp | 1238626 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721755 |
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| Product | CheD, stimulates methylation of MCP proteins |
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| Protein accession | YP_864931 |
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| Protein GI | 117924314 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000449804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.590403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCGG GCTCCGAGAT AGGCACCCAT TTTTTACTGC CTGGCACCCT CTATGCCAAG
CCGGGCGTGC ATCGCATAAC CACCGTACTG GGCTCCTGCG TGGCCATTTG CCTATGGGAC
CAACGCCGCC GCGAAGGGGG CATGAACCAT TTTAAGCTGC CTTTGTGGAA TGGTGACGGT
CTGCCCTCGC CCAAATTTGG CAACATCGCC ACCGAAAAGT TGTTAGAAAA TCTCCTGCTC
ATGGGTTGCG ACCGCCGCCA AATGCAAGCC AAGGTGTTTG GTGGTGCCGC AGTATTGAAC
CATCAGAGCG GTCTGCTTAA CGTGGGCGAG CGCAACATAC AGGTCGCCAT GGATATGTTA
CGCCAATTTA AAATACCGGT TACAGCCCAG GATTTAGGTG GGGAGATGAG CCGTAAAATT
GTGATGGACA CCAGCACCGG AAGCATCTTG ATGAAACGCG CCAAAAACGC ATGA
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| Protein sequence | MVAGSEIGTH FLLPGTLYAK PGVHRITTVL GSCVAICLWD QRRREGGMNH FKLPLWNGDG
LPSPKFGNIA TEKLLENLLL MGCDRRQMQA KVFGGAAVLN HQSGLLNVGE RNIQVAMDML
RQFKIPVTAQ DLGGEMSRKI VMDTSTGSIL MKRAKNA
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