Gene Mmc1_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1005 
Symbol 
ID4481170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1237060 
End bp1237443 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content55% 
IMG OID639721753 
Producthypothetical protein 
Protein accessionYP_864929 
Protein GI117924312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000344414 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.889606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACC GTTTTAATGT TTGGGCAACC ACCCCACAAC CTCCGCTGTT GCCCCTGTCA 
GCGATGGCGG GTTGGGTGGC GCTGTTTATG GCGGTGGCAG GCTTTATTCC CTTGTGGGGG
GGCTATTTTC TGGCGGTTTC GGCCTTGCTG TTGCCCTTGA CGGCGGGGCC TAGCCGGTGG
CTTGGTCTAG GGATCGCGCT GCTTAACCTC TTTAATCTGA TGTTTTTTTC TAAGATATAC
CAAATGGCCG CAATCTCTGG TATGCACCAA GGGCGTTATG AAATGGTGGT GGTCTACGCC
GGATTAATGG TGGCACAACT GCTGGGGCTG TTGGGTCTGT TTTTGCTCCA GCGCCGCATG
CGGCAGTTGG GTATTTGGCC ATAG
 
Protein sequence
MLHRFNVWAT TPQPPLLPLS AMAGWVALFM AVAGFIPLWG GYFLAVSALL LPLTAGPSRW 
LGLGIALLNL FNLMFFSKIY QMAAISGMHQ GRYEMVVVYA GLMVAQLLGL LGLFLLQRRM
RQLGIWP