Gene Mmc1_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0990 
Symbol 
ID4482983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1214220 
End bp1214915 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content57% 
IMG OID639721738 
ProductABC transporter, permease protein, putative 
Protein accessionYP_864914 
Protein GI117924297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.108548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCT GGCTGGCCCT GGGGGGGTAC ATGTTTGTGG GGGCGCTGCT CAACTATAAA 
CAGGCTCTCC TCCAATACAG TGCCTATGGG GTGCAGCAGC TACCCCTGAG CGATTTTGTC
ATGCTGCCCC TGTTGAGCAA TGTGGCCGTG CTGTTGTTGT TGATTATGCC GGTTTTAACG
ATGGGTACCT TAGCGGGTGA AAAACGGGCG GGCAGTTGGC CAGCCCTTGC GACCTCGGCC
ATTACACCGG GTGCCATTGT ACTGGGCAAA TTTTTTGGAT TGCTGCTGTT TTTATGGCTA
CTGCTGGGCC TGTTGGTGCT GCTGCCACTG TCGTTGTTGC CCTTTGCCCG CCTGGATTGG
GGGCAGGTTG CGGCGGGCAT GCTGGGATTG GGCTTGTTAA GTTCCGCTTT TTGTGCGCTG
GGCATAGCAA CCTCGGCCCA TACCGATAAC CCGGCCATGG CGGCGCTGTT TGCGTTTGCC
TTGCTGCTGC TGCTATGGAT TATCGGGTGG ATGGCTGGCT CTGCCGAGGC GGGTTGGCAA
CAGCTTCTGC TCCATCTCTC CCTCATGAAC CGTTTGCAAA ATTTTTTGGA AGGTACCCTG
CGGCTGTGGG ATCTGCTCTA CCTGCTGGGT TTGAGTGGCT TTGCCCTCTA TCTCGCCACG
CTACGGTTGC ATCTGCAACG GGTATGGGGG GGTTAA
 
Protein sequence
MAIWLALGGY MFVGALLNYK QALLQYSAYG VQQLPLSDFV MLPLLSNVAV LLLLIMPVLT 
MGTLAGEKRA GSWPALATSA ITPGAIVLGK FFGLLLFLWL LLGLLVLLPL SLLPFARLDW
GQVAAGMLGL GLLSSAFCAL GIATSAHTDN PAMAALFAFA LLLLLWIIGW MAGSAEAGWQ
QLLLHLSLMN RLQNFLEGTL RLWDLLYLLG LSGFALYLAT LRLHLQRVWG G