Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0990 |
Symbol | |
ID | 4482983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1214220 |
End bp | 1214915 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721738 |
Product | ABC transporter, permease protein, putative |
Protein accession | YP_864914 |
Protein GI | 117924297 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.108548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCT GGCTGGCCCT GGGGGGGTAC ATGTTTGTGG GGGCGCTGCT CAACTATAAA CAGGCTCTCC TCCAATACAG TGCCTATGGG GTGCAGCAGC TACCCCTGAG CGATTTTGTC ATGCTGCCCC TGTTGAGCAA TGTGGCCGTG CTGTTGTTGT TGATTATGCC GGTTTTAACG ATGGGTACCT TAGCGGGTGA AAAACGGGCG GGCAGTTGGC CAGCCCTTGC GACCTCGGCC ATTACACCGG GTGCCATTGT ACTGGGCAAA TTTTTTGGAT TGCTGCTGTT TTTATGGCTA CTGCTGGGCC TGTTGGTGCT GCTGCCACTG TCGTTGTTGC CCTTTGCCCG CCTGGATTGG GGGCAGGTTG CGGCGGGCAT GCTGGGATTG GGCTTGTTAA GTTCCGCTTT TTGTGCGCTG GGCATAGCAA CCTCGGCCCA TACCGATAAC CCGGCCATGG CGGCGCTGTT TGCGTTTGCC TTGCTGCTGC TGCTATGGAT TATCGGGTGG ATGGCTGGCT CTGCCGAGGC GGGTTGGCAA CAGCTTCTGC TCCATCTCTC CCTCATGAAC CGTTTGCAAA ATTTTTTGGA AGGTACCCTG CGGCTGTGGG ATCTGCTCTA CCTGCTGGGT TTGAGTGGCT TTGCCCTCTA TCTCGCCACG CTACGGTTGC ATCTGCAACG GGTATGGGGG GGTTAA
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Protein sequence | MAIWLALGGY MFVGALLNYK QALLQYSAYG VQQLPLSDFV MLPLLSNVAV LLLLIMPVLT MGTLAGEKRA GSWPALATSA ITPGAIVLGK FFGLLLFLWL LLGLLVLLPL SLLPFARLDW GQVAAGMLGL GLLSSAFCAL GIATSAHTDN PAMAALFAFA LLLLLWIIGW MAGSAEAGWQ QLLLHLSLMN RLQNFLEGTL RLWDLLYLLG LSGFALYLAT LRLHLQRVWG G
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