Gene Mmc1_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0989 
Symbol 
ID4482982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1213156 
End bp1214151 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content59% 
IMG OID639721737 
ProductABC transporter related 
Protein accessionYP_864913 
Protein GI117924296 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00029019 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.847424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACG ATGCTAAAAT AGTCAAACTG TCGCCAAACT CCGAGGCTCC CCATGCCGCG 
CCGGTTCCGT TGATCCGCTT GCAGGGCGTG TGCAAGCAGT ATGGTGCGTT ATCCGCTTTG
CAAGGGGTTA ACCTAACCGT CGCGCGGGGC GAAGTGGTGG GGTTTTTGGG CCCCAATGGG
GCAGGTAAAA CCACCACCAT GTCCATCTTG GCTGGCCTCT TGGCCCCCAC AGAGGGCGTG
GTGCAGGTGG CCGGGGTGGA TATGCTGCGC CACCCGCAAC AGGCCAAACC GCATATAGGC
TTTCTACCCG AACAGCCCCC GCTTTATAAA GAGATGACGG TACAGGCGTA TCTGAGCCAT
TTGGCCCGGT TGCGCGGGGT GGCGGCCCGT CAGTGCCGTG AGGCGGTTAG CCAGGTTATG
GCGCAATGCG GTCTTAACCC CGTGGCCGGG CGCGTGTTGG GGCATCTTTC TAAAGGGTAT
CAACAACGCG CGGGTATTGC GCAGGCTTTG GTGCATCGCC CAGAGGTGGT GATTTTAGAT
GAACCCACCA GCGGATTAGA CCCCCTGCAA ATCCAGGAAA TTTGTCTGTT GATCCGTAGT
CTCGGCCAAC AGCACGCGGT GTTGTTATCC ACCCATATTC TCTCTGAGGT GCGCATGACC
TGTGATCGGG TGGTGTTGAT TCATCAAGGC AAAATCCAAC TGGATACCAG TATGGCCGAC
CTGGAGCAAC ATCTGCAAGC TCCCCAAGTG GTGCAGGTAA GTTTAGCCAA CGATCCAGGT
CAGGCGGTGT TAGCCGCCCT ACCGGGGGTG GCGCATGTTG AAGCCTGTGC GGGAGGGTGG
CGCATTACCC CGCAGCAGGA TGCGGATCCC GTACCTGCCT TGCTGGCCGC TGCGGTGGCC
CAGCATTGGG GTCTGCGTCA ATTGCAGCCT CAGCAGGCCC CCTTGGAGAG TCTCTTTACC
GCGCTCGCCC AAACAGACCA GGAGGAGCTA CGGTGA
 
Protein sequence
MQNDAKIVKL SPNSEAPHAA PVPLIRLQGV CKQYGALSAL QGVNLTVARG EVVGFLGPNG 
AGKTTTMSIL AGLLAPTEGV VQVAGVDMLR HPQQAKPHIG FLPEQPPLYK EMTVQAYLSH
LARLRGVAAR QCREAVSQVM AQCGLNPVAG RVLGHLSKGY QQRAGIAQAL VHRPEVVILD
EPTSGLDPLQ IQEICLLIRS LGQQHAVLLS THILSEVRMT CDRVVLIHQG KIQLDTSMAD
LEQHLQAPQV VQVSLANDPG QAVLAALPGV AHVEACAGGW RITPQQDADP VPALLAAAVA
QHWGLRQLQP QQAPLESLFT ALAQTDQEEL R