Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0989 |
Symbol | |
ID | 4482982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1213156 |
End bp | 1214151 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721737 |
Product | ABC transporter related |
Protein accession | YP_864913 |
Protein GI | 117924296 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00029019 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.847424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG ATGCTAAAAT AGTCAAACTG TCGCCAAACT CCGAGGCTCC CCATGCCGCG CCGGTTCCGT TGATCCGCTT GCAGGGCGTG TGCAAGCAGT ATGGTGCGTT ATCCGCTTTG CAAGGGGTTA ACCTAACCGT CGCGCGGGGC GAAGTGGTGG GGTTTTTGGG CCCCAATGGG GCAGGTAAAA CCACCACCAT GTCCATCTTG GCTGGCCTCT TGGCCCCCAC AGAGGGCGTG GTGCAGGTGG CCGGGGTGGA TATGCTGCGC CACCCGCAAC AGGCCAAACC GCATATAGGC TTTCTACCCG AACAGCCCCC GCTTTATAAA GAGATGACGG TACAGGCGTA TCTGAGCCAT TTGGCCCGGT TGCGCGGGGT GGCGGCCCGT CAGTGCCGTG AGGCGGTTAG CCAGGTTATG GCGCAATGCG GTCTTAACCC CGTGGCCGGG CGCGTGTTGG GGCATCTTTC TAAAGGGTAT CAACAACGCG CGGGTATTGC GCAGGCTTTG GTGCATCGCC CAGAGGTGGT GATTTTAGAT GAACCCACCA GCGGATTAGA CCCCCTGCAA ATCCAGGAAA TTTGTCTGTT GATCCGTAGT CTCGGCCAAC AGCACGCGGT GTTGTTATCC ACCCATATTC TCTCTGAGGT GCGCATGACC TGTGATCGGG TGGTGTTGAT TCATCAAGGC AAAATCCAAC TGGATACCAG TATGGCCGAC CTGGAGCAAC ATCTGCAAGC TCCCCAAGTG GTGCAGGTAA GTTTAGCCAA CGATCCAGGT CAGGCGGTGT TAGCCGCCCT ACCGGGGGTG GCGCATGTTG AAGCCTGTGC GGGAGGGTGG CGCATTACCC CGCAGCAGGA TGCGGATCCC GTACCTGCCT TGCTGGCCGC TGCGGTGGCC CAGCATTGGG GTCTGCGTCA ATTGCAGCCT CAGCAGGCCC CCTTGGAGAG TCTCTTTACC GCGCTCGCCC AAACAGACCA GGAGGAGCTA CGGTGA
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Protein sequence | MQNDAKIVKL SPNSEAPHAA PVPLIRLQGV CKQYGALSAL QGVNLTVARG EVVGFLGPNG AGKTTTMSIL AGLLAPTEGV VQVAGVDMLR HPQQAKPHIG FLPEQPPLYK EMTVQAYLSH LARLRGVAAR QCREAVSQVM AQCGLNPVAG RVLGHLSKGY QQRAGIAQAL VHRPEVVILD EPTSGLDPLQ IQEICLLIRS LGQQHAVLLS THILSEVRMT CDRVVLIHQG KIQLDTSMAD LEQHLQAPQV VQVSLANDPG QAVLAALPGV AHVEACAGGW RITPQQDADP VPALLAAAVA QHWGLRQLQP QQAPLESLFT ALAQTDQEEL R
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