| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0981 |
|---|
| Symbol | |
|---|
| ID | 4482974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1203540 |
|---|
| End bp | 1206812 |
|---|
| Gene Length | 3273 bp |
|---|
| Protein Length | 1090 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639721729 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_864905 |
|---|
| Protein GI | 117924288 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.546511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC GATTGGGCCT ATCGGGTAGC GTGGCTAAAA AATTTCAAAA TTCGGAGATC
ACTCCCCTGT TGGCCATTGT GGGTTTTTTG CTTGGGCTGT TTGCCATTGC CGTGACCCCG
CAGGAGGAAG AGCCCCAGAT CTCTGTCACC TTTGCCAATG TCTTTATTCC CTACCCTGGT
GCCAGCGCGG CCGAAGTGGA GCAGACGGTG ACGGTGCCTG CTGAGCAAGT GCTGTCCGAG
GTCTCGGGGG TTAAACATGT CTACTCTTTC TCCCGGGATG GCATGGCGGT GTTGACCGTG
CGCTATCGGG TGGGAGAAGA CCAAAATGCG GCGATTTTGC GCTTGTACAA CGCCATTTTT
TCCAATGAAA ATTTTCTGCC CCAGGGGTTG GGGGTGGGTA AACCCCTGGT CAAGCCCATG
GGGATTGATG ATGTACCCAT CCTCTCCTTT ACCCTATGGA GTGATGATCC GGCCATCAAC
GGTTATGAGT TGACCCAAGT AGCCCACTCT GTTGAGGCAG AGCTCAAGGG GATTGAAGGC
ACCCGTAAGG TCTACACGGT GGCGGATGTG GAGCGCGTGG TCAATGTGCA ACTGGACCCC
GTGCGGCTGG CCGGTTACGG TCTGACCATG GAGGGTTTGG CCAAAAGTTT AATGGGGGCT
AACCGTCATG GCCTGTCGGG CACCTTTGTG GAGGGCAATC AAGCCATCCC GGTTTATGCG
GGGGATTTCC TCTCCAGTGC CGAGGAGATC GCCGATCTGG TTGTCGCTCA ACATGAGGGG
CGGTTGGTTC ATCTCTCTGA CGTAGCGGAT GTCGAGTTGG GGCCAGATAC GCCGAGTTCC
TACGGTTGGT TTGCTACTGG GCCCTCGGCT TGGATAAAAG GGATTGAAAA GTCTGGACGT
TATCAGTCTG TTACCATTGC GGTTTCAAAA AAGGAAGGCT TGAATGCGGT CTCGATCTCC
AAGGCGGTCA TCGCCAAGAT GGACAATCTC AAGGGCTATC TGATCCCCGA TAATGTGCAG
GTGACCCTGA CCCGCGACTA TGGTGCCACC GCCGAAGCCA AGGCCAATAA ACTGATTGGA
AAACTTGGTT TTGCCACCGC CTTTGTGGTG TTGCTGGTGT TGCTCACCAT GGGCTGGCGA
GAGGCGTTGA TCGTGGGGGT GGCGGTGCTG CTTACCCTGG CCTTGACCCT GTTTGGTAAC
TGGGCCTGGG GCTTTACCTT GAACCGGGTT TCGCTGTTTG CATTGATCTT CTCCATCGGT
ATTTTGGTGG ATGACGCCAT TGTGGTGGTG GAAAATATTC ACCGGCACAT GCATGGCAGT
ACAAAAAAGC TATTGGATAT TATTCCCAAA GCGGTGGATG AAGTGGGTGG ACCTACCATC
TTGGCTACCT TTACGGTGAT TGCCGCCCTG TTACCCATGG CTTTTGTGAC GGGCTTGATG
GGGCCATATA TGAGCCCCAT TCCCATCAAT GCCAGTACGG GTATGTTGAT CTCTCTGGTG
GTGGCTTTTG TAGTAACCCC CTGGCTTACC TATAAAGGCT TGAACGGGGT TCACAACAAG
CATTTGGCGG CCCACGCGGG TGCTGCGGTG GCCCATGAGG ATGACGCCCC CCCCACGGAG
GAGGTCTCTT CGGGTATGCT TAAATTGTTT CGTGGTATCT ATGGTCCGTT TGTGACCAGC
AAGGTAGCTT GGTTTAACCG TACGGTGCTG GCCTTGGTGA TGATTGGCTT GATCGCCGCC
TCGCTTTATT TGGTGGTCAA TGGTTCGGTT ATCCTAAAAA TGCTGCCCTT TGATAATAAA
TCGGAGTTTC AAGTGGTGGT GGATATGCCT GAAGGGACCA CCACCGAGGG CACCGCCGCC
GTCATGGAAG CGTTGGGGGC CTATCTGATT ACGGTACCTG AGGTGACAGA TATTCAATCC
TATGTGGGTA CCGCATCCCC CGTTGGTTTT AATGGTCTGG TGCGGCAGTT TTACCTGCGT
AAAGGGCCTA ATGTTGGGGA TATTCAGATC AATTTGGTGG ATAAGCATCA CCGCGAGCGC
AAGAGCCATG ATGTCGCCCG GGCGGTACGT CAGCCTCTTC AAGAGATTGG GGCGAAATAT
GGTGCCAACG TCAAGATCGT GGAGGTCCCA CCCGGACCGC CGGTGCAGTC ACCCCTAGTG
GTAGAGGTCT ACGGACCCAA CTATGTCACC CAGATCGAAT ATGCCCAACA GATCGAAAAA
CTTTTCCATG CCACACCGGA TATTGTGGAT ATTGACACCA GTGTCGAATC CCCAGCCAAG
CGCATGCAAA TTCGGGTAGA CCGCAAACGG GCGGCTCAGT TGGGGGTGGA TGCCGGATCG
GTTATCAATG TAATTCAGAG CGCCCTAGAG GGGAAAAATG CGACCTATCT GCATGTGACC
GATGCCAAGC AGGCGATCCC TGTGCGTATC TCCTTGCACG ACGATTGGAA GCATAGTGTG
GATAACCTGA TGGCCTTAAA GTTGGATTCT CATCTGGGTC AACAGGTGCC TTTAACCGAG
GTGGTGCAGA TCTCCTATGG CAAGATCAAC CCGGTTATTC ACCATAAAAA CCTCAAACGG
GTGGTCTATG TCACCGGTGA TATGGCGGGT GCAAAGGATA GCCCGTTGTA TGGCTTGATG
GAGATCGACA GTGCCATGGG GCAGATGCGT GCCCAGGGTG GTCAGGCCAT GGAGCGCTTT
TTTATCAAGC AGCCCAGCAT GACCGCCGAG ATCTCCACCA AATGGGATGG TGAGTGGCAG
ATTACCTACG AGACCTTCCG CGATATGGGC ATTGCCTATG GTATTGGTCT GCTGATGATC
TATCTATTGG TGGTGGCACA GTTTCGCAGT TATGTGGTGC CCATCGTGAT TATGATGCCC
ATTCCGCTCA CCGTGATTGG GGTTATGCCC GGTCATGCGA TCATGGGGGC GCAGTTCACG
GCTACCTCTA TGATTGGCAT GATCGCGCTG GCGGGTATCA TCGTGCGAAA CTCGATTTTG
CTGGTGGACT TTATCAATGA AGAGACATCC GCTGGTCTAC CCTTTGCCGA AGCGGTGATC
CATGCTGGAG CGGTGCGCTC AAAGCCCATC TTGCTGACGG GTTTTGCGGC GATATTGGGC
GCATTGTTTA TTCTGGATGA TCCCATTTTC AGTGGTTTGG CCATTTCACT GATTTTTGGG
ATCTTTGTCT CAACCATGCT CACCCTGATC GTGATACCTG TGACATACTA CAGTGTGATG
AATAAACGAT TTGCCGCACA AGCCACAGCC TAA
|
|---|
| Protein sequence | MSERLGLSGS VAKKFQNSEI TPLLAIVGFL LGLFAIAVTP QEEEPQISVT FANVFIPYPG
ASAAEVEQTV TVPAEQVLSE VSGVKHVYSF SRDGMAVLTV RYRVGEDQNA AILRLYNAIF
SNENFLPQGL GVGKPLVKPM GIDDVPILSF TLWSDDPAIN GYELTQVAHS VEAELKGIEG
TRKVYTVADV ERVVNVQLDP VRLAGYGLTM EGLAKSLMGA NRHGLSGTFV EGNQAIPVYA
GDFLSSAEEI ADLVVAQHEG RLVHLSDVAD VELGPDTPSS YGWFATGPSA WIKGIEKSGR
YQSVTIAVSK KEGLNAVSIS KAVIAKMDNL KGYLIPDNVQ VTLTRDYGAT AEAKANKLIG
KLGFATAFVV LLVLLTMGWR EALIVGVAVL LTLALTLFGN WAWGFTLNRV SLFALIFSIG
ILVDDAIVVV ENIHRHMHGS TKKLLDIIPK AVDEVGGPTI LATFTVIAAL LPMAFVTGLM
GPYMSPIPIN ASTGMLISLV VAFVVTPWLT YKGLNGVHNK HLAAHAGAAV AHEDDAPPTE
EVSSGMLKLF RGIYGPFVTS KVAWFNRTVL ALVMIGLIAA SLYLVVNGSV ILKMLPFDNK
SEFQVVVDMP EGTTTEGTAA VMEALGAYLI TVPEVTDIQS YVGTASPVGF NGLVRQFYLR
KGPNVGDIQI NLVDKHHRER KSHDVARAVR QPLQEIGAKY GANVKIVEVP PGPPVQSPLV
VEVYGPNYVT QIEYAQQIEK LFHATPDIVD IDTSVESPAK RMQIRVDRKR AAQLGVDAGS
VINVIQSALE GKNATYLHVT DAKQAIPVRI SLHDDWKHSV DNLMALKLDS HLGQQVPLTE
VVQISYGKIN PVIHHKNLKR VVYVTGDMAG AKDSPLYGLM EIDSAMGQMR AQGGQAMERF
FIKQPSMTAE ISTKWDGEWQ ITYETFRDMG IAYGIGLLMI YLLVVAQFRS YVVPIVIMMP
IPLTVIGVMP GHAIMGAQFT ATSMIGMIAL AGIIVRNSIL LVDFINEETS AGLPFAEAVI
HAGAVRSKPI LLTGFAAILG ALFILDDPIF SGLAISLIFG IFVSTMLTLI VIPVTYYSVM
NKRFAAQATA
|
|---|
| |