| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0980 |
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| Symbol | |
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| ID | 4482973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1202462 |
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| End bp | 1203547 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721728 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_864904 |
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| Protein GI | 117924287 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.233971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCT ATGTCAAATA TCTCGTGCTG TCCGTTGCTA TGTGGGTGGG TCTATCATCC
GTGGCCGCAG CTTCGTCTTT GGCAACCGTC ACGGTTACCA AAACGCAGAG CCCCAAACTG
CTCCCAATAC CAGGCAATGT GGAGGCCATT AACCAAGCCA CCATGACCGC AAAAACGGCG
GGTACCATCG TGGAGTTAAA CTTTGACGTA AACGATTATG TTAAAAAAGA CCAGGTTCTG
CTCAGCTTTA AGGGTAAGCG CAATCAGGCG GGCCTCTCTC AAGCCCAAGC CGGGGTCAGT
GAAGCCGAAG CCCGTGTGGT CGAAGCGCGT AATGAGTATA ACCGGCTTAA ATCGCTGTTT
GATCAAAAGA TGGTGACGGC CTCGCAAATG GATCAAGCGC AGGGTTCGCT GCAAGCGGCC
CGCGCACGCT TGAACGCCGC CAAAGCAGGG CTCACCAGTG CCAGTGAAGG GGTGGATGAC
ACGGTGCTGC GTGCGCCCTA TTCCGGTTAT GTGACGCAAC GCTTTGTGCA ACTGGGCGAA
AATGCCAGCG TGGGGCAGCG GTTGTTTACG GGAATTTCGT TGGATGAGCT GCGGGTAATA
ACCAACATTC CGCAAAAATA TGCGGATGTG GTGCGGGTCA CCCGCTCGGC GCTGGTGGAA
ATCTCATCCT CCTTGGCGCA GCAGGTAAGG CGCATACCCG TTAAGGATGT GGTGGTGTTC
CCCGTAGCGG ACCCCGCGAG CCGTACGGTG GGGGTGCGTA TCAAGCTGCC CGAAGGCATA
CAAGGTATCT ATCCGGGGAT GCTGGTTAAA GTGTTTTTTG TCATCGGTCA GCAGGAAAAA
CTGATCATTC CAGAATCCAC CGTGGTACGG CGCAGCGAAT TAACCGCCGT CTATGTCATG
AACCCAGGGC AACCAGCACC CATGTTGCGC ATGGTGCGCC TCGGCCAGGT AGATGAGGCT
CAACAGGTCG AGGTGGTCTC TGGCTTATTG GAGGGAGATC TGGTGGTCAA GCAGCCTGCG
CTGGCTACCC AGGTGGCGTT GAGTCACTAC CAATCCATGC GTAAAAAGGA TGCGATCCAT
GAGTGA
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| Protein sequence | MNLYVKYLVL SVAMWVGLSS VAAASSLATV TVTKTQSPKL LPIPGNVEAI NQATMTAKTA
GTIVELNFDV NDYVKKDQVL LSFKGKRNQA GLSQAQAGVS EAEARVVEAR NEYNRLKSLF
DQKMVTASQM DQAQGSLQAA RARLNAAKAG LTSASEGVDD TVLRAPYSGY VTQRFVQLGE
NASVGQRLFT GISLDELRVI TNIPQKYADV VRVTRSALVE ISSSLAQQVR RIPVKDVVVF
PVADPASRTV GVRIKLPEGI QGIYPGMLVK VFFVIGQQEK LIIPESTVVR RSELTAVYVM
NPGQPAPMLR MVRLGQVDEA QQVEVVSGLL EGDLVVKQPA LATQVALSHY QSMRKKDAIH
E
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