Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0978 |
Symbol | |
ID | 4482971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1199338 |
End bp | 1200678 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639721726 |
Product | transposase, IS4 family protein |
Protein accession | YP_864902 |
Protein GI | 117924285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.057902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.226488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGGT TCAAATTGGA GCAATCGGAG CAGGAGATCT ACACGGCGAC CAGTGGTCTG GCACTGGCAG GCGCTTGTCT GGACCGCTAT GTGAATTTGG ACAAGGAATT GAAGAAAGCA CAGCCGTTGC GACACGGTAT CAGCCATGCT GACATTGCTC GCAGCTACCT GGGTTTGTTG TTGCAGGGCA AGAGCGACTT TGAGGCGATT GCACAGTTCA GAGAAAATCG ATTTTTCATG GAGGCACTTG GTATAGCCCA TGTGCCATCC ATTGCGAGAA TGCGCCAGCG GCTGGATGAA GGGGCTGAAT CGTGGTTGTC TGTAATAGAG TGCTGCACAG TTGATTTTTT GGTCAACGCC GAAGTTCCCG TGACGTGCTT GGTGACCGGG CATGTGGCGC TGGATATGGA TGTGTTTCCT ATGGACAACT CCAGCACGAA GAAAGCGGGG GTTTCCCGCA CCTACAAGGG ACATGACGGA TTCGCGCCCA TTGGGGCCTA CCTCGGGGAA GAGGGCTGGT GTGTTGGGAT GGAGTTTCGT GAGGGCAAAC AGCACAGCCA GAAGGGATTT ATTTCCTTTT TGACGCGTGT GTTGCCCCAA GCCCGCCGCT TGAGCGCCAG TCACCGTTTA CTGGTCCGCC TGGATAGCGG GCACGATGCG CTGGAAACGC GTGTGGCGTT GGTAAACGAG GATACCGATT ATATTCTCAA ATGGAATCCC CGAACCGCTG ATATGACACC CTGGCTGGCC ATGGCGGAAG AGGAAGAGTG CTGGGTTGAA ACACGTCCTG GAAAGTTTGT TTCCCGGTTC AGCGTCATTG AGGAGCAAAG CTACGAGGGC CAAAGCTATC AGTTCCGGCG CGTGATGCAG GTGACTGAAC GCCGAATTGA TCGTCACGGA CAAGGCTTGC TGGTTCCCGA TGTGGAAGTT GAGGGCTGGT GGACATCGCT GGACTTGGTG GAAGAGGATG TCATTGCCCT TTACAAGGCA CACGGGACAT CAGAGCAATT TCACAGCGAG TTCAAGACAG ACCTGGATTT GGAGCGGCTT CCGTCGGGCA AGTTTGCCAC CAACGCCCTG GTTATGGGAA TGGCGGCATT TGCCTACAAT ATCCTGCGGT GGATCGGACT TTTGGGTCTG ATGGGCAAAG ATGGGCCAGT GCGGCACCCA GCTAAGCGTC GGCGTTTGAA GACGGTTATC CAAGAGATGA TCTATCTGGC CGCTCGCTTG GTCAGAAGCG GAAGGCGGCT ACGATTGCGC TTTGGACTGA ATTGCCCTGC ATTCGACGCA TTCGAACGGG TGTATGAGCG ATTTGCTCCT GGAAAGCTGT TGGTTGGATG A
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Protein sequence | MKRFKLEQSE QEIYTATSGL ALAGACLDRY VNLDKELKKA QPLRHGISHA DIARSYLGLL LQGKSDFEAI AQFRENRFFM EALGIAHVPS IARMRQRLDE GAESWLSVIE CCTVDFLVNA EVPVTCLVTG HVALDMDVFP MDNSSTKKAG VSRTYKGHDG FAPIGAYLGE EGWCVGMEFR EGKQHSQKGF ISFLTRVLPQ ARRLSASHRL LVRLDSGHDA LETRVALVNE DTDYILKWNP RTADMTPWLA MAEEEECWVE TRPGKFVSRF SVIEEQSYEG QSYQFRRVMQ VTERRIDRHG QGLLVPDVEV EGWWTSLDLV EEDVIALYKA HGTSEQFHSE FKTDLDLERL PSGKFATNAL VMGMAAFAYN ILRWIGLLGL MGKDGPVRHP AKRRRLKTVI QEMIYLAARL VRSGRRLRLR FGLNCPAFDA FERVYERFAP GKLLVG
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