| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0976 |
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| Symbol | |
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| ID | 4480498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1195883 |
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| End bp | 1197286 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639721724 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_864900 |
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| Protein GI | 117924283 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0149677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0700259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACC ATGATACCAC AAAAAAGCGC ATCGCCATCA TTAACATGGG GTGCCGGGTT
AATCAATTTG AAGGGGCGGC CATGCAGGCG GAGGCTGCCC AAATGGGCTA CGTCAGCGCA
ACGGCAGATG AGACGGCTGA GGTGGTGATT GTCAATACCT GCTCGGTCAC GGCCCAGAGC
GATAGTCAGG CGCGTAAGCA GATTCGCCGT ATCGCGCGGG AGAACCCCCA TGCCCAAATA
TTGGTGACCG GCTGTTATGC CCAGCGCAAT CCCCAACTGC TGGCGGAGCT ACCCGGTGTG
GCGCTGGTAT TGGGTAATCA GGAAAAACGC GGCATCGCCA AAGAGTTGGC CATCCTGGAA
GCCAAACCCC TGGCGCAACC CGCCACCCAG CAAGTGGCCC CGATGCCGCG TACGCCCCTG
CGCCAGAGCG GATTAGAACC CCTCGCGGAG GAGGCCCCCT TGCCACGCTG GGAAGAGGGG
CCGCTGGTGG CTGCCGATGC CTTTAAAGGG CAGGCGCGTG CCTTTGTGCA GGTGCAAAAT
GGCTGCGATA AACGCTGCAC CTTTTGTGTG ATCCCGGCGT TACGGGGACC ATCCCGCTCC
CAATCCCCCC AGTGGGTGAT GGCGCAAGCT CAAAGCTTTT TGCAGGCAGG CTATCAAGAG
TTGGTGCTTA CTGGCATCGA CCTGGGCAGC TATGGCCGGG AGCAGACGGG GCAGGGGTGG
TCCTTGGCTC GTTTGGTGGA GCAGCTGCTA AGCCTGGATG GCTTGGCCCG TTTGCGGCTC
TCCTCCATTG ACCCGATGGA TATGGAGCCA GCGTTGATTG CGTTGATGGG GCGTGCGCCC
AAGCTCTGCC CCCATCTGCA TCTCTCCATG CAATCCGGCG ATGACCAAGT GCTCAAACGC
ATGCACCGGG GCAGCACCCG GCAGGCCCTG CTGGAGCGGG TTGCTCAACT GCGGGCGGTG
CGCCCCGAAC TGGTATTGGG GGCCGATCTG ATTGTGGGCT TTCCCACAGA ATCCGAGGCC
GCGTTTGAGC AAAGCTGTGA CATGGTGCGC CGCTTGGAGA TCTCACTGCT GCACATTTTT
CGTTACTCGG CCCGACCCGA TACCCCCGCA GCCGCCATTC CCCGCCGTTT TCATGTGGAG
GATACGCGCA TTAAAGCACG GGCCAAACAG TTGGCCATGG TGGGGGGAGC GGTATGGCAA
CAGGTGGCCC AGCGGCGGGT GGGCTGTCAT GACCGTGTGT TGGTGGAGCA GAGCGATGCC
CAGGGGCGGT TATTGGGAAA AAATGACAGC TTTTTCGATG TGGTGGTGGA AAATACCCCT
GCCACAGCTG GCACGCTGCT ACCGGTGGAA ATTGTGGGCT GGGATGCCGA TGCCCGTCAC
CTGCTGGCGC GGGCGTTGAG CTAA
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| Protein sequence | MDDHDTTKKR IAIINMGCRV NQFEGAAMQA EAAQMGYVSA TADETAEVVI VNTCSVTAQS
DSQARKQIRR IARENPHAQI LVTGCYAQRN PQLLAELPGV ALVLGNQEKR GIAKELAILE
AKPLAQPATQ QVAPMPRTPL RQSGLEPLAE EAPLPRWEEG PLVAADAFKG QARAFVQVQN
GCDKRCTFCV IPALRGPSRS QSPQWVMAQA QSFLQAGYQE LVLTGIDLGS YGREQTGQGW
SLARLVEQLL SLDGLARLRL SSIDPMDMEP ALIALMGRAP KLCPHLHLSM QSGDDQVLKR
MHRGSTRQAL LERVAQLRAV RPELVLGADL IVGFPTESEA AFEQSCDMVR RLEISLLHIF
RYSARPDTPA AAIPRRFHVE DTRIKARAKQ LAMVGGAVWQ QVAQRRVGCH DRVLVEQSDA
QGRLLGKNDS FFDVVVENTP ATAGTLLPVE IVGWDADARH LLARALS
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