| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0973 |
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| Symbol | |
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| ID | 4480495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1190072 |
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| End bp | 1193539 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639721721 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_864897 |
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| Protein GI | 117924280 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.117254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGG TTGATGCCCA AGCCCGCGCG CGGGCGTTGG ATCCAGAAGG CTCCTTTATT
GTCCAAGCCC CGGCGGGTTC CGGCAAAACC GGACTGCTGA CCCAGCGTTT TTTGCGGCTG
CTGGCGGTAG TGGATAAACC GGAGCAAATT TTAGCCATTA CCTTTACCCG CAAAGCGGCT
GCGGAGATGC GGGGCCGCAT TGTGGAGGCG CTGGCCGAGG CGGCCCGTGG TGTGGTGCCC
GTTGAACCCT TTGAGCGGCA ACGCTATGAG CTGGCGCGTG GGGCGCTGGC GCAGGATCAT
GCCCATGGCT GGCAGCTGCT GCACAATCCC CAGCGTCTGG CGGTGATGAC CATTGATGCG
CTTTCAAGTC GTTTAACCCG GCAAATGCCG GTGCTCTCTG GCTTTGGCGG CAGTTTTGAA
CGGGCCGATG AGCCTGAGCC GCTCTACCAA CAAGCGGCCC GCAGCTGTTT AGAAACGTCG
ATGCAGGAGC CCGCCGACTC GCCCCGCCAT CAAGCCGTCT GGCGACTGTT GCAGCACCGG
GATTATGACT TTCAGCGGCT GGAGCAGCTG CTGGTGGAGA TGCTGGCGCG GCGGGATCAA
TGGATCTATC ATCTGCAAAA CCAGGATGGT TTGCAGCGTG AGGTGTTGGA GCAGGCGTTG
TGGCATCTGG TGGAGGGGCA GTTGCAAGGG CTCGCCCAGC GCTTTGATGC GCATAAGCGT
CTGCAATTGG TGCAACTGGC CCGCTACGCC GCCGCTAATC TGCCCGACGA GGGGAACGCT
TCTTTAAGGT CGTGGCTGGA TGCGCAGGAT TTTCCCGGTA CCGCCCCCCA TGATCTGCCC
TTATGGCGGG GTTTGGCTGA GTTGCTGGTG ACGGCTGATG GCGCTTGGCG CAAAAGGGTG
GATAAAAATT TGGGCTTTCC TCCCGCCAGC GCCTTTAATA ATAAAGAGGA GCAGCAGCAG
GCCCAGCAGC AGAAAACGGC ACATGCCACG TTGCTGGAGG ATCTAAAACG CTTTCAACTC
ACCCTTAATG AGGCCCTGCA AGGGGTTAAA AGCATGCCCA CGCCCGGTTA TGGCGAAGCA
GAGTGGGCGG TGTTGGAGGC GTTGGGGCTG GTGCTCAAGT TGGCGGTGGC TCACCTGCGC
TGGGTCTTTA ATAAGGTGAG CAAGGTGGAC TTTGCCGAGG TGTCGTTGCA GGCGGTAACC
GCTTTGGGCA CGCCAGATAA CCCCACCGAT CTAACCCTGG TGTGGGATTA TAAACTGCGC
CATCTGTTGG TGGATGAGTT TCAAGATACC TCGCAGTTGC AGATCAAACT GCTGGAGGGG
TTGACCGCAG GCTGGAGTGC AGAAGATGGG CGCACACTGT TTTTGGTGGG GGACCCCATG
CAGTCCATCT ACCGTTTTCG CAAGGCCGAG GTGGCCCTGT TTGCACAGGT GCGTGAGCAG
GGTTTGGGCA GCATAAGCGT CGAACCGTTG CAGTTAGAGG TAAACTTTCG CTCCAATGCG
GGGGTGGTAG GGTGGGTTAA CGAAGCCTTT GAGCAGCTCT TTCCTGAACA GGAAGATAGA
GACCTGGGGG CGGTGCCCTA CCATCATTCG GTGCCCTTTC ATGGGGCCAG TCATGGGGTG
GCGGTGCAGT GGCATCCGGT GCAAGGGGGG CTTGACGGGG CCCTGCGCGA AGCCCAACAG
ATGGTGCGGA TCATTGAACA GACCCGGCAG CAGAACCCAC AAGGTTCATT GGCGGTGCTG
GTGCGGGCGC GGCCCCACTT GGCGGCGCTG GTGCCGCTGT TGAAAGCGGC GGGTATTCCC
TTTCAAGCGG TGGAGATTGA TGCGCTGGAG CGTCGGCCCG TGGTGCAGGA TTTATGGAGC
CTGAGCCGAG CCTTGCATCA GCCTGCTGAC CGTATCGCGT GGCTGGCGCT GCTGCGGGCG
CCATGGTGTG GATTAAGCCC CGCTCAGCTC GTGCCGCTGG CGGAGGGGCA GGGTAGCGGC
ACGCCCCTGT GGCAGGCGCT ACAGGATAAG AGACGAGTGG AACAGTTGGA ACCCATGGCC
CAGGGGCGTC TAAACCGCTT GGTCGAGGTG CTGCAAGGGG CGTTGGCCCA GCGGGGACGG
GTAGGGTTGC GGCAGTGGAT TGAGGGGTGT TGGCATGCGC TGGGTGGTCC CGCCACCGCC
GGGGGGGCCG AGGGTATGCA GGATGCCAGC CGCTATTTTG CCCTGCTGGA GCAGTTGGAA
AGCCGGGGTG AGGTGGTGGA TTGGCCCGCC TTGGGGGGGC GTTTGCAACG TCTCTATGGG
GCGGGTGCCG AGGCGGGTCC TGGGGTGGTG CAGTTGATGA CCATTCATAA ATCCAAGGGG
CTTGAGTTTG ATACGGTGAT TTTACCGGGT CTCAATCGAC CGGGTAAGGT GTCCGAACGG
CCCTTGTTAG AGATGTGGGA GCGCAGCCAC ATTCATGAAT GGGGCGGGGT GGAGCGGCAA
TTGCTGGTGG CACCGATCCC TTCGGCGGCG GATGAAGAGG CCCCCCTGTT TGCCTTTTTA
CGCCGTGTGC AAGGTGAGCA AGAGCGGCAT GAGATGCGCC GCCTGCTCTA TGTGGCGACC
ACCCGCGCCA AGCAGCATCT ACACCTGTTG GCACTCTTGT CGGAGCAGGA TAAAGATCCC
AAAGCCAATC TGCCCCTGGG TATGCTCTGG CCCACTCTGT CGACCATGGA TCCCGCCGAG
CCCGGCGCCC CACCGCCACC GCCCCAGGCG GCGCAGGCGC CGCGTCCCCT CTGGCCCCAG
ACCTTGCAGC GCTTGGCGGA TGGTTGGCAG CCCCCACCAC CGCCCCCAGC GGTTGCGGTG
TTGCGGGATG AGGGCATGGC AGAACCCGAG GGGGAGCCGC CCCGCTATGA CTGGGCCGGG
GAGCCGGCCC GTATGGCCGG TATTGTGACC CACGAGTGGT TGCAGATTAT GGCGCAACAG
GGGGTAGCAA GCTGGCGACC CGCCCGGGTC GAGGCGCTGC AAGGGGCCAT TGCGTCGCGT
CTGGTGGCAC TGGGGCTGGC TAAAAACCGT ATTGAGGAGA CCGCGCAACG GGTGGTGCAG
GCTCTTAAAC AGGCACTCAC GACGCTCTTG GGCCGTTGGA TTTTGCATGA CGGCCATCAA
GAGGCCGCCT GCGAACGGGA GCTAACCGGG GTGCTGGGGG GGCGCTTAAC CCGCATTGTT
ATCGACCGTA CCTTTGTGGA TGAAGAGGGG GTGCGCTGGA TTATTGATTA TAAAACTTCG
GCCCACAGCG GGCAGGATGT GGATGGCTTT TTGGATAATG AGGTGGTGCG CTACCGCCAA
CAGTTGGAAA ATTATGCGCG GATTCTTGGG GCGTTGGAAC AGCGGCCTAT CCACTTGGGG
CTCTATTTCC CACTGTTAGA GGGGTGGCGT TGGTGGCCAG CGGGCCAGCA CCAGGTGTCT
AGCCGACTGC CCATGCGGCC TGGTGAGCAG GGAAGGCTGT TTGAGTAA
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| Protein sequence | MSLVDAQARA RALDPEGSFI VQAPAGSGKT GLLTQRFLRL LAVVDKPEQI LAITFTRKAA
AEMRGRIVEA LAEAARGVVP VEPFERQRYE LARGALAQDH AHGWQLLHNP QRLAVMTIDA
LSSRLTRQMP VLSGFGGSFE RADEPEPLYQ QAARSCLETS MQEPADSPRH QAVWRLLQHR
DYDFQRLEQL LVEMLARRDQ WIYHLQNQDG LQREVLEQAL WHLVEGQLQG LAQRFDAHKR
LQLVQLARYA AANLPDEGNA SLRSWLDAQD FPGTAPHDLP LWRGLAELLV TADGAWRKRV
DKNLGFPPAS AFNNKEEQQQ AQQQKTAHAT LLEDLKRFQL TLNEALQGVK SMPTPGYGEA
EWAVLEALGL VLKLAVAHLR WVFNKVSKVD FAEVSLQAVT ALGTPDNPTD LTLVWDYKLR
HLLVDEFQDT SQLQIKLLEG LTAGWSAEDG RTLFLVGDPM QSIYRFRKAE VALFAQVREQ
GLGSISVEPL QLEVNFRSNA GVVGWVNEAF EQLFPEQEDR DLGAVPYHHS VPFHGASHGV
AVQWHPVQGG LDGALREAQQ MVRIIEQTRQ QNPQGSLAVL VRARPHLAAL VPLLKAAGIP
FQAVEIDALE RRPVVQDLWS LSRALHQPAD RIAWLALLRA PWCGLSPAQL VPLAEGQGSG
TPLWQALQDK RRVEQLEPMA QGRLNRLVEV LQGALAQRGR VGLRQWIEGC WHALGGPATA
GGAEGMQDAS RYFALLEQLE SRGEVVDWPA LGGRLQRLYG AGAEAGPGVV QLMTIHKSKG
LEFDTVILPG LNRPGKVSER PLLEMWERSH IHEWGGVERQ LLVAPIPSAA DEEAPLFAFL
RRVQGEQERH EMRRLLYVAT TRAKQHLHLL ALLSEQDKDP KANLPLGMLW PTLSTMDPAE
PGAPPPPPQA AQAPRPLWPQ TLQRLADGWQ PPPPPPAVAV LRDEGMAEPE GEPPRYDWAG
EPARMAGIVT HEWLQIMAQQ GVASWRPARV EALQGAIASR LVALGLAKNR IEETAQRVVQ
ALKQALTTLL GRWILHDGHQ EAACERELTG VLGGRLTRIV IDRTFVDEEG VRWIIDYKTS
AHSGQDVDGF LDNEVVRYRQ QLENYARILG ALEQRPIHLG LYFPLLEGWR WWPAGQHQVS
SRLPMRPGEQ GRLFE
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