| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0967 |
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| Symbol | |
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| ID | 4480489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1182442 |
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| End bp | 1184046 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721715 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_864891 |
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| Protein GI | 117924274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.708453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000509397 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTC AAGCGCACCC CCCTGTTGTT CTCTATGATA CCACTCTGCG TGATGGCTCT
CAGAGCGAGG ATGTGCTCTT TTCTGCCGAA GATAAATTGC GCATTGCCAA GCGTTTGGAT
GCGCTTGGGT TGGACTATAT CGAGGGTGGC TGGCCCGGTG CTAATCCTAA GGATGATGAC
TTTTTCCGGC AGGCTAAACA GCTCAAGCTG CAAAAAAGCC GCATTACCGC CTTTGGTTCC
ACCCGCCGGG CCGGGTCTAA GGTGGAAGAG GATCAGGTTA TCAAGGGTCT GTTGGGGTCG
GGTGCGCAGG TGATTACGGT GTTTGGCAAA AGTTGGGATC TGCATGTTTC CCGCGCTTTG
GGCATCCCCC TGGCACAAAA TTTAGAGTTA ATTTTTGATA CCATTCGCTA TCTCAAACGG
CATGTGGATG AGGTGTTCTA TGATGCAGAG CACTTTTTTG ATGGCTATCG GCGTAATCCA
GAATATGCCC GCCAGACCCT GCAAGCCGCC TATGAGGGCG GTGCCGACGC ACTGGTTTTG
TGCGACACCA ATGGCGGCAC GATGGTTGAA GATTTACGCC GCATGATCGG CGAGGTGACG
GATCTGGGCG CACCATTGGG CATCCATTGC CACAACGATT GTGAGCTGGC GGTAGCCAAC
TCCTTGGCGG CGGTGGAGGC CGGTGTCACC CATATTCAGG GCACCATTAA TGGGATTGGG
GAGCGCTGTG GCAACGCTAA TTTGATCTCC ATTATCCCGA ATCTTAAATT TAAAATGCAG
CGCAGCTTAA CCTTGGACGA TGAGGATCTT ACCCAACTTA CGGCGGTGAG CCGTTTTGTT
AATGAAATGG CCAACCGTCC CACCCAGAAA AATCAACCCT ATGTGGGGGT GTCGGCGTTT
GCCCACAAGG GGGGTATCCA TGTATCGGCG GTGCTTAAAG ATGCCAGCAC CTATGAACAT
ATTAGTCCAG ACTTGGTGGG CAATCAGCAG CGGGTATTGG TCAGTGAGCA GGCGGGGCGC
AGCAATCTGA TCTATAAGTT AGAGGAGTTG GGTATTGAAG GGGTGGATGC CAAAGATCCC
CGTCTAACTG AACTGCTGCT GGATGTTAAA GAGCTGGAGC ACCAAGGCTA CCAATTTGAT
GGGGCAGATG CCTCGTTCCA ACTGCGGGTG TGGAAGGCGC TGGGGGAGTT GCCCAACTAT
TTTGAGCTGC TGGGCTTTCG GGTCATAGAT GAACGCCGGG TGCGCAAGGA TGGTCAACAC
CCCATGGGGG CAGAAGCGAC GGTCAAAATG CGGGTAGCGG GGGAATCGGT GCATCTGGTG
GCCGAAGGGG CTGGCCCGGT GGATGCCCTG CACAAGGCGC TAAGTAAAGC GCTGCGGCGG
GATTACCCCA TGGTGACAGA GCTGAAGTTA GAAGATTTTA AGGTGCGTAT TTTGGGCAAT
CGCAAGGGTA CCGAGGCTAC CGTGCGGGTG CTTATTGAGT GGTATGATGG CCGTTGCCGC
TGGGGCACTG TGGGGGTTTC GGACCATATT ATCGCCGCCT CTTACGATGC CATGGTTGAG
GCGGTTAAGT ACAAGCTGTT TAAAGATAAA GTTAAACCTG TTTAA
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| Protein sequence | MSAQAHPPVV LYDTTLRDGS QSEDVLFSAE DKLRIAKRLD ALGLDYIEGG WPGANPKDDD
FFRQAKQLKL QKSRITAFGS TRRAGSKVEE DQVIKGLLGS GAQVITVFGK SWDLHVSRAL
GIPLAQNLEL IFDTIRYLKR HVDEVFYDAE HFFDGYRRNP EYARQTLQAA YEGGADALVL
CDTNGGTMVE DLRRMIGEVT DLGAPLGIHC HNDCELAVAN SLAAVEAGVT HIQGTINGIG
ERCGNANLIS IIPNLKFKMQ RSLTLDDEDL TQLTAVSRFV NEMANRPTQK NQPYVGVSAF
AHKGGIHVSA VLKDASTYEH ISPDLVGNQQ RVLVSEQAGR SNLIYKLEEL GIEGVDAKDP
RLTELLLDVK ELEHQGYQFD GADASFQLRV WKALGELPNY FELLGFRVID ERRVRKDGQH
PMGAEATVKM RVAGESVHLV AEGAGPVDAL HKALSKALRR DYPMVTELKL EDFKVRILGN
RKGTEATVRV LIEWYDGRCR WGTVGVSDHI IAASYDAMVE AVKYKLFKDK VKPV
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