| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0963 |
|---|
| Symbol | |
|---|
| ID | 4480485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1178876 |
|---|
| End bp | 1179610 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639721711 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_864887 |
|---|
| Protein GI | 117924270 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.168083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00146596 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAC CCTTTCCCGC CATGATTTTG GCTGCGGGTC GGGGGACGCG ACTGGCGGCG
TGGACCGAGC ACACCCCCAA GCCGTTGGTG CCGGTGGCTG GCACGCCGGT GATCTTTTTA
ACCTTGCAGC GGTTGGCGTG GCTGGGGTTT CGCCGGGTGG TGATTAATGC CCACCATCTG
GGGGCGCAAC TGCGGGAACA GGTGGGGGAT GGGCAACGCT GGGGGGTGCA GATTCAGTGG
TCCATGGAGC CGCAGTTGCT GGAGACGGGC GGGGGGGTGT GTCAGGCCTT GCCGCTGCTG
GATGCCCCGC AGTTTTTGGT GGTGAATGGG GATGTGGTAT GGGATCTGGA TCTGCGACCG
TTGCTGGAGG GATTTGATCC CCGGCGCATG GATGCCCTGT TGGGCTTAGT AGAAAATCCA
GCTGAAGGGG TGGGGGATTT TGTGCGGGAT GGGGCCGGCT GTTTGCAACG GGGTCGTGGG
GTGGTGGGCA GTTGGACCTA TAGTGGTATT CAAATATTGG CCCGGCATGC CTTGCAGGGT
TATGCGATAG AGCCCTTTTC GCTCAACCGG GTCTACGATG CGGCGCTGGC TAAGGGGCGT
TTGCAGGGGG TCCCCTTGCG GGGGTTTTGG GCGGATATGG GCACCCCTGA ACGGCTGGCC
CAAACCGAAA AGCACTGGCG TGAGCATAAC CCAGTGGTGA TGCAGAGGAT TGTTGCACAA
AATGCGCTGG ATTAA
|
|---|
| Protein sequence | MEIPFPAMIL AAGRGTRLAA WTEHTPKPLV PVAGTPVIFL TLQRLAWLGF RRVVINAHHL
GAQLREQVGD GQRWGVQIQW SMEPQLLETG GGVCQALPLL DAPQFLVVNG DVVWDLDLRP
LLEGFDPRRM DALLGLVENP AEGVGDFVRD GAGCLQRGRG VVGSWTYSGI QILARHALQG
YAIEPFSLNR VYDAALAKGR LQGVPLRGFW ADMGTPERLA QTEKHWREHN PVVMQRIVAQ
NALD
|
|---|
| |