Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0962 |
Symbol | |
ID | 4480484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1177854 |
End bp | 1178876 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639721710 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_864886 |
Protein GI | 117924269 |
COG category | [R] General function prediction only |
COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.135258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0017288 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGGATA ATGCCCTTCG TGCTTTTGCT GAACGCCACG CTCCCCATCA TCAAGAGATT GTGCAGGTGG CGGGGGATGC CTCCTTTCGC CGCTACTATC GGTTGGTGGA TAACCCCTCG CGCATTGTGA TGGATGCCCC ACCGGATAAA GAGGATAGCC ATCCCTTTGT GGCCATCGCC GGTTTTTTGC GTGAGCATGG GGTGCTGGCG CCTCAGGTTT TGCAAGCTGA CTATGAACAG GGGCTGTTTT TGTTGGAGGA TTTTGGCGAT ATAACCTTTG CCCGCGCCCT GCAACAGGGG GTGGCCCCGG AGCGGCTGTA TGGGGCGGCT GTGGATGCCC TGCTCACCCT ACAGGCGACA CCGTTGGAAG GGGGTACGGT TGCCCATCAA CGCGCCTTTG ATCCCCCTCT GTTTGCCTAT GAGGCCTCGT TGTTGACCGA GTGGTACATC CCTGGGGTGA TGGGTTATAC CTTGAGTGGG GCGGAACAGG CGGAGTTTAA GCGGGCCTTT GATGAGCTGT TGAGGCCGAT CTTGGCGCAG CCCCAAGTGT TGGTGCATCG GGACTATCAC AGCCGCAACC TCATGTGGTT GGAAGGGCAG GTTGGGGTGC TGGATTTTCA GGATGCGGTA ATGGGACCCA TTACCTATGA TCTAGCCAGT CTGCTACGGG ACTGTTACGT CGCGTGGGAC CGCCCCTTTC GCCATGCCAT GATGCAGCAG TGGCTCAGCG GTGCCACCCA GCGGCTGGGG TATGCACCAA CCTGGGCCAG CTTTGAGCGG GCATTTGATT GGATGGCCAT TCAGCGCAAC TTAAAAGCGG TAGGTATCTT TGGACGGTTG GCGCTGCGGG ATGGCAAGTT TGCTTATCTG GACGATGTGC CCCGCACCAT GGGCTATGTA TGGGAAACAC TGGCCCGTTA TCCAGAATTA GGGCGGCTGC ACACGCTGTT GCAACGGACC ATTCCCCCAG GCACAGAGCC GAGTTCTGCC CAAGTGGCGG CGCGTCAGAC CGGAGCGTTG TAA
|
Protein sequence | MLDNALRAFA ERHAPHHQEI VQVAGDASFR RYYRLVDNPS RIVMDAPPDK EDSHPFVAIA GFLREHGVLA PQVLQADYEQ GLFLLEDFGD ITFARALQQG VAPERLYGAA VDALLTLQAT PLEGGTVAHQ RAFDPPLFAY EASLLTEWYI PGVMGYTLSG AEQAEFKRAF DELLRPILAQ PQVLVHRDYH SRNLMWLEGQ VGVLDFQDAV MGPITYDLAS LLRDCYVAWD RPFRHAMMQQ WLSGATQRLG YAPTWASFER AFDWMAIQRN LKAVGIFGRL ALRDGKFAYL DDVPRTMGYV WETLARYPEL GRLHTLLQRT IPPGTEPSSA QVAARQTGAL
|
| |