Gene Mmc1_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0947 
Symbol 
ID4482746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1164556 
End bp1165473 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content57% 
IMG OID639721695 
ProductL-lysine 2,3-aminomutase 
Protein accessionYP_864871 
Protein GI117924254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00167419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00202939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCAG AACCCCAGCT TACCCCACAG CAGCAACTGG CCCATCGCGG TTTTCCCATG 
CTGTTGACCC CAACCATGGC CGATTGCATG CGACAACCCC AGGAGCAGGA TCCCATCTAT
CGCCAATTCT GGCCCTCCGC TGAGGAGCTA CAGAACCCCC CGCACTACAC CACAGACCCC
TTGCAAGAGG CCGCCAGCTC CCCCATGCCC GGCCTTGTGC ATAAATACCA AGGCCGCGCC
CTCTTGCATT TGACCGATGC CTGCCCGGTC CATTGCCGTT ACTGTTTCCG CCGCCATGGC
GCCATTACAT CCCCTATGGA TCCACAAGCC GAGCAGCAGC TTGTTGACCA TTTAGCCCAA
GATCACACAC TACAAGAGAT CATTTTATCT GGCGGTGATC CGCTCATGCT GAACGCACCC
AAATGGCACT GGTGGATGAC CCAGTTGGCG CAATTACCCC ATCTGCAACG CATCCGCATC
CATAGCCGGG TACCCGTAGC AGACCCCTCC CGCCTGACCA TCCCCATGCT TGAAACACTA
CAAAATACGG CTAAATCCGT GGTTTTGGTG ATCCATTGCA ACCATGCGCA GGAGCTCACC
CCAGCCAGTG AAGTGGCTTT ACAGGCGTGT CGTCAGGCGG GGTTTTTAGT GCTTAATCAG
TCGGTATTAT TAGCTGGCGT CAATGACTCG GCAGAGATCT TGGCCAAACT GAATCTAGCC
TTGGTGGGGT TGGGCGTACT GCCCTACTAT TTACATCTTC TGGACACCGT GCAAGGAGCC
GCCCATTTTG AGGTCAGCCC CCAGCGGGCG ATGGAGATTA TGCGGCAGTT GCACCAGTGT
TTGCCCGGTT ATGCCCTACC CAAGCTGGTC AGGGAACGCC CCGAACTACC CGGCAAAGAG
CCCATCCACT GGTTTTAA
 
Protein sequence
MPAEPQLTPQ QQLAHRGFPM LLTPTMADCM RQPQEQDPIY RQFWPSAEEL QNPPHYTTDP 
LQEAASSPMP GLVHKYQGRA LLHLTDACPV HCRYCFRRHG AITSPMDPQA EQQLVDHLAQ
DHTLQEIILS GGDPLMLNAP KWHWWMTQLA QLPHLQRIRI HSRVPVADPS RLTIPMLETL
QNTAKSVVLV IHCNHAQELT PASEVALQAC RQAGFLVLNQ SVLLAGVNDS AEILAKLNLA
LVGLGVLPYY LHLLDTVQGA AHFEVSPQRA MEIMRQLHQC LPGYALPKLV RERPELPGKE
PIHWF