| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0942 |
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| Symbol | |
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| ID | 4482741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1158757 |
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| End bp | 1160580 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721690 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_864866 |
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| Protein GI | 117924249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0078454 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00866297 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGCA CCCACTATTG TAACGATGTG CGGGAATCCC AGATTGGTGA AACCGTTGTG
CTGGAAGGTT GGATCAACCG CCGCCGGGAT CATGGCGGGG TTATCTTTGT TGATCTGCGG
GATCGCACGG GTCTGGTCCA GGTTGTGTTC AGCCCCGAGC TGTTTGCCGA ACCCCACGCC
CAAGCCCACA CTCTGCGCAG CGAATATGTG ATTCGCGCCA CCGGCAAGGT GACAGCCCGC
AGCGAAGGCA CCATCAATCC CAATATGGAT ACCGGTCGCA TTGAGGTGGT GGTGGAGGAT
TTAACCATTC TCAACAGCTC GCTGCCGCTG CCCTTTCAGT TGGATGATGA GATCTCGGAA
AACCTGCGTT TACAATACCG TTTCCTTGAT CTGCGCCGCC CGGATATGCA GCGCAATCTG
ATGTTCCGTC ACCGGATCAT GCAATCGGTA CGTAAACATC TGGATGGCTC GGGCTTTGTG
GAGGTCGAAA CCCCCATGTT AACCCGCAGC ACCCCTGAAG GGGCGCGGGA CTATCTGGTG
CCCTCACGGG TCAACCCAGG GGATTTTTAT GCCCTGCCCC AGTCACCTCA GCTCTTTAAA
CAGCTGCTCA TGATGGCGGG CTATGATCGT TATTTCCAGA TTGTACGCTG TTTTAGGGAT
GAAGATCTGC GCGCTGACCG TCAGCCCGAG TTCACCCAGA TTGATCTTGA GATGTCTTTC
GTTGAGCCCA ACGATGTCAT GGAACTCACC GAGAGCGTGG TGGTGGAGGC CTTTAAAGAG
GCACTTGGGG TCTCCATTCC CCAACCTGTA CGGCGCATCA CCTATGCCGA AGCCATGGAT
AAATATGGTT TGGATGCCCC AGATATGCGT ATTACCATGG AGCTGAAAGA TCTGACCGAA
GTAATGAAAA GTTCGGAATT CAAGGTGTTC CGCCAAGCGG CCACCCTGGA GGGGCGTGGC
AATGAGCACG GCTTGGTCAA GGTGCTCAAG GTTCCTGGTG GCGGCAGTTT GACCCGCAAA
CAGATCGACA CCTATACCGA ATTTGTAGGC ATCTATGGGG CCAAAGGGCT GGCTTATATC
AAGGTCAACG GCCCCTGGCA GGAGGATGGC TGGCAATCCC CCATCGTTAA ATTTTTGGGC
GATGCTGAAA AACAGGCCAT TCAAGAGGCT ACCCAAGCCC AGGTCGGTGA TCTACTCTTC
TTCGGCGCGG ACAAAGCCAG TGTGGTGAAT GAATCTCTAG GCCGTCTGCG GGTAAAATTG
GGCAAAGAGT TAGAGATGCT CTGTGACGAA AAATTTGCCT TTGTCTGGGT AACGGACTTC
CCCCTGCTGG ATTGGGACAA CGAAGCCCGC CGCAACACAG CGGTACACCA CCCCTTCACT
GCGCCCCACC CCGACGACAT TATCTATTTA GAGAATGCCG ATGGAGCCTC GGTGGAGCAT
CCTTTGGAGA AAGTGCGCTC GCTGGCCTAC GATCTGGTGT TAAATGGTAC CGAGGTTGGC
GGTGGCTCGA TTCGTATTCA CGATACGATG CTCCAGCGCC GCATGCTGGA GCTGCTGGAG
ATTGGCGAAG AGGAGGCCGA GGGCAAATTT GGCTTCCTCC TCCGTGCGCT ACAGTATGGT
GCGCCACCCC ATGGTGGTTT GGCCTTGGGT CTGGACCGTT TGGTCACATT GATGTTGGGG
TTGGACTCCA TTCGCGATGT GATCGCCTTC CCAAAAACCC AAAAGGCCAC CTGTTTGATG
ACCGAGGCTC CCTCCAAGGT GGATGGCGCT CAGTTAAAAG AGCTGCACCT ACGCAGCACC
TTTAAGCCCA AAACGGCGGA GTAA
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| Protein sequence | MKRTHYCNDV RESQIGETVV LEGWINRRRD HGGVIFVDLR DRTGLVQVVF SPELFAEPHA
QAHTLRSEYV IRATGKVTAR SEGTINPNMD TGRIEVVVED LTILNSSLPL PFQLDDEISE
NLRLQYRFLD LRRPDMQRNL MFRHRIMQSV RKHLDGSGFV EVETPMLTRS TPEGARDYLV
PSRVNPGDFY ALPQSPQLFK QLLMMAGYDR YFQIVRCFRD EDLRADRQPE FTQIDLEMSF
VEPNDVMELT ESVVVEAFKE ALGVSIPQPV RRITYAEAMD KYGLDAPDMR ITMELKDLTE
VMKSSEFKVF RQAATLEGRG NEHGLVKVLK VPGGGSLTRK QIDTYTEFVG IYGAKGLAYI
KVNGPWQEDG WQSPIVKFLG DAEKQAIQEA TQAQVGDLLF FGADKASVVN ESLGRLRVKL
GKELEMLCDE KFAFVWVTDF PLLDWDNEAR RNTAVHHPFT APHPDDIIYL ENADGASVEH
PLEKVRSLAY DLVLNGTEVG GGSIRIHDTM LQRRMLELLE IGEEEAEGKF GFLLRALQYG
APPHGGLALG LDRLVTLMLG LDSIRDVIAF PKTQKATCLM TEAPSKVDGA QLKELHLRST
FKPKTAE
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