| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0932 |
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| Symbol | |
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| ID | 4481584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1143926 |
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| End bp | 1145152 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721680 |
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| Product | type II secretion system protein |
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| Protein accession | YP_864856 |
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| Protein GI | 117924239 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000581212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0185308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATT TCTACTACAA ATACTTGAGC AAGGATGGCC CCATTGCAAC GGGGTTGATA
GATCTGCCCT ACGATAACCC GATTTCGGCT ACCACCTATC TGGAGCAGCA GGGCCACACG
GTGATTGTGG TTAACCCGCT GAGCCCCTTT ATGGGAGCGT TGGCGGGGTT GGCGATCCAC
ACCTTTGAAA AAAAAGTGAC CATGGAGGAG CTGGCCGAGG GGTTAACCAA CATGGCGGTT
ATGCTTAAAG CCGGTATTCC CCTAATCACC TGTCTTAAAG ATACCATTGC CGATCATGAC
AACTCGACCC TATCCAAGGT GGGGCAGCAG TTGGTTATGC GGGTGGAGGG TGGCTCCAGT
CTGGCAGAGG CATTGGCGGC TTATCCCCGT TATTTTCCCG ATACCTTGGT CTTTTTGGTG
CGCTTGGGGG AGGAGACCGG TAGCCTGGAT CAGACCGTGC GTGATGCCGC CGCCCACACG
CAGAAGATGG ATAAAATCCG GCGGGATACC AAAAGCGCTT TAACCTATCC CACCTTTATG
TTTGTGGCCA TTTTTGGGGC GATGTTCTTC TGGATCTACC TGGTGGTCCC GCCCATGGCT
GATATGTTTA AACAGTTTCA GCTGGATCTG CCGGTATTTA CCAAGATGGT GATCGACGGT
TCTGTGGTGA TCAAAGCCAA TGTGGGGATG ATCTTCGGTG TGCTATTGGG GACCATTTTT
ACCTTGGTCG CCCTGGTTAA ATCCAGCGCA GCGGTGCGTA AATTAATCCA AAGAATTTTG
ATGAAAACAC CGATTTTTAA GGTGATTCTT ACCGCTTTTA ACCTCGCTTT TATTACCCAA
TATATGAGCA TGATGCTCAG GGCCGGGGTG GATGTGATGC GCACCTTGCA GGTGTTGAAA
GAGGCGATTC CCAACGAGAT CTACCGGGAG CATTTGGACC AAGTACAGGA GAATTTGGTT
TCGGGGATTG GCCTGCGGGA ATCCTTTGAT AAGGTGGGGA TCTTTCCCAA CTTTGTGGTG
CGTATGATCG GTGTGGGGGA GCAGTCGGGT ACCTTGAGTG AACAGCTGGA GTATATTGCT
GAAGATTATC GGGTTAAGCT TGATGAGTTG GTGGGGAATA TTGGTAAGTT GGTGGAGCCC
ATCGCCATTG TGGTGGGGGG CGGTCTGTTT ATTGCGCTGG CCATGGCGCT GTTTGCCCCC
CTCTACCAGT TGATTAAAAA TATTTAA
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| Protein sequence | MAYFYYKYLS KDGPIATGLI DLPYDNPISA TTYLEQQGHT VIVVNPLSPF MGALAGLAIH
TFEKKVTMEE LAEGLTNMAV MLKAGIPLIT CLKDTIADHD NSTLSKVGQQ LVMRVEGGSS
LAEALAAYPR YFPDTLVFLV RLGEETGSLD QTVRDAAAHT QKMDKIRRDT KSALTYPTFM
FVAIFGAMFF WIYLVVPPMA DMFKQFQLDL PVFTKMVIDG SVVIKANVGM IFGVLLGTIF
TLVALVKSSA AVRKLIQRIL MKTPIFKVIL TAFNLAFITQ YMSMMLRAGV DVMRTLQVLK
EAIPNEIYRE HLDQVQENLV SGIGLRESFD KVGIFPNFVV RMIGVGEQSG TLSEQLEYIA
EDYRVKLDEL VGNIGKLVEP IAIVVGGGLF IALAMALFAP LYQLIKNI
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