Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0931 |
Symbol | |
ID | 4481583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1142232 |
End bp | 1143887 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721679 |
Product | type II secretion system protein E |
Protein accession | YP_864855 |
Protein GI | 117924238 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.1993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0211669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC AGCCGCGTAA AAAACCCATT GGTGTGCTGC TGCAAGAGAA GGGTTTGATC TCCGATGCCC ACATCGGTCT GGCTTTGCAG GATCAGAAAA TCACAAAAGA GCGGGTGGGT GAAATTCTTG AGCGGTTGGG CTTTGTCTCC CAGTACGATG TGGCCACCAC CATCTCGGAG CAGGAGGATC GCCCCTATCT GGATATTAAC GCGGTACGCC CAGCGGAGGA GAGCCTGCGG CTGTTTAACC GCAATATCTG CGAACAAAAC GATTTTTTGC CCATGCGCCA TGATACCCAA GCCGGGGCCA TTGAGTGCGT AACCGCCGCA GATGATGTGG TGGCCCTGGA TAAATTGATT ACCCGCCATA CCGGTTTAAA GCCCTTCTTT TACCAGGGGG AAAAGGGCAA AATCCGCAAT GCGGTGCAGT ACTATTACTA TTTTCTGGAA AACCCGGTGG AGAAGTTGCT GGAGCGGGAA ATCCAGTTGC TTAGTATGGA TAAGGATGAT GTGCGCAATC TGGATAACTT TGTGGCGCAT CTTTTTCAGT TGGCGGTTAA AAACCGCGCC TCGGATATTC ATATACGCCC CATGGACCGG GCGATTAACA TCGCCTTTCG TATTGACGGT GTGTTGCGTC CCATGTTTTC CCTGCCCCCC AGCATGAAAC GGGTGATTAC CACCCTGAAG ATGCGGGCGG ATATGGATAT TGCCGAGCAG CGTCTGCCCC AGGATGGGAG CTTTGGTGAG ACCATTTTGA CCAACCACTA TGATTTTCGG GTCTCCACCA CGGTTTGCCC CTATGGGGAA AATATGGTGA TGCGTCTGTT GCCCGCCAAG AGCGACTTTA TGGGCCTGCC CCAGTTGGGT TTTGAACCCG ACGATATTGA GCTGGTGCGG CAGATTTTTA ACGAACCCTA TGGCATTGTG CTGCTGACTG GGCCGACCGG ATCGGGTAAG ACCACGACGC TGTATGCGGC GGTGCGGGCG TTAAACTTGA CCGAAAAGAA TGTGATGACG GTGGAAAACC CCATCGAATA TCGTATTCCC TTGATGCGCC AGACCCAGAT TAATACCAAG GCTGGTTACA CCTTCTCCAG CGCCATTCGC CACTTTTTGC GGCATGATCC AGATGTTATC TTGGTGGGGG AAATTCGCGA TAAAGAGACC GCCGAAACCG CCATCTCCGC CTCGGAGACC GGCCACTTGG TGCTCTCGAC CTTGCACACC AACACCGCCT TTGGTGCGTT GCCCCGTTTG CGTTCGCTGG GGATCCCGCC CTTTATGTTG GCCGATTCTT TGGTTGGGGT GGTGAGTCAG CGTTTGGTCC GTAAAATTTG CCCCACGTGC AAAGAGGCCT ATACCCCCAG TCAGGAGGAG TTGGACTACC TCAAGATTGA GGGGTTGGAT ACCCTCTACC GGGGGGTGGG GTGTGAAACC TGCTTTGGGA CAGGTTTTCA TGGTCGTACC TTGGTCTATG AGGTGCTACG TTCGTTCCCC GCCTTGGCGG TTGCCATTGG TAATGATGCG ACCTTGGATG AGATGCGCCA TATTGCGGTA AGCAATGGGT ATCGTGAGAT TGAGACCTGT GCCCACGCCA AGCTGGTGCG GGGAGATGTC TCCCTGTCAG AAGTGGTGCG GGTGCTGGGT TATTAA
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Protein sequence | MNDQPRKKPI GVLLQEKGLI SDAHIGLALQ DQKITKERVG EILERLGFVS QYDVATTISE QEDRPYLDIN AVRPAEESLR LFNRNICEQN DFLPMRHDTQ AGAIECVTAA DDVVALDKLI TRHTGLKPFF YQGEKGKIRN AVQYYYYFLE NPVEKLLERE IQLLSMDKDD VRNLDNFVAH LFQLAVKNRA SDIHIRPMDR AINIAFRIDG VLRPMFSLPP SMKRVITTLK MRADMDIAEQ RLPQDGSFGE TILTNHYDFR VSTTVCPYGE NMVMRLLPAK SDFMGLPQLG FEPDDIELVR QIFNEPYGIV LLTGPTGSGK TTTLYAAVRA LNLTEKNVMT VENPIEYRIP LMRQTQINTK AGYTFSSAIR HFLRHDPDVI LVGEIRDKET AETAISASET GHLVLSTLHT NTAFGALPRL RSLGIPPFML ADSLVGVVSQ RLVRKICPTC KEAYTPSQEE LDYLKIEGLD TLYRGVGCET CFGTGFHGRT LVYEVLRSFP ALAVAIGNDA TLDEMRHIAV SNGYREIETC AHAKLVRGDV SLSEVVRVLG Y
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