Gene Mmc1_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0921 
Symbol 
ID4483201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1126965 
End bp1128731 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content57% 
IMG OID639721669 
Productcarbamoyltransferase 
Protein accessionYP_864845 
Protein GI117924228 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTGA TTGTTGGGAT CAACGCCTAC CACGCGGATG CTTCGGCGTG CATTGTGGTG 
GATGGTCGGT TAATCGCAGC GGCGGAAGAA GAGCGCTTTC GACGGATCAA ACATTGGGCG
GGCTTTCCAG AGCTCGCCTT GCGCTACTGT CTGCAAGCGG CGGGCGTGGC ATTGTCGGAT
GTGGATGTGG TGGCGGTCAA TACAGACCCC AAAGCCAACC TTGGCCGTAA GCTGGCCTTT
ACCCTGCTGC GCTGGCCCAG CCCGGCGCTG CTGCTGGATC GGGTGCGCAG CGCAGGCAAA
CGGGGTGGGG TGGCGCAAGA GCTGGAACGC TTGTTCCCTG GCACCCCCTT TCAAGGACAA
GTGGTGGCGG TGGAGCACCA CCGGGCCCAT ATGGCCTCGG CTTTTTTAGT CTCGCCCTAT
GACAAGGCGG TGGTGTTGTC GGTGGATGGT TTTGGCGATT TTAGCTCCAC CGTTTGGGGG
TTAGGGCAGG GCAGCGATTT TTCCATGGAT GGGGCGATCC ATTTTCCCCA CTCTTTAGGC
ATTTTTTATC AAGCGCTCAC CCAATATCTG GGCTTTCCCA ACTATGGGGA TGAGTATAAG
GTGATGGGCT TGGCCCCCTA TGGTGAGCCC CGCTACGTGG ATCAATTAAA CAAGATCGTG
CGGCTGCGGC CCGCCGGGCG GTTTGCCCTG GAGATGCGCT ATTTTAAACA CCATAAAATC
CCCTCGGTGT TCGCTTGGGA GGGGGGGGCG CCCCGCGTGG CGACCCTCTA TAACCGCACC
GCACTCGAAC CTTTGTTGGG GCCACCTCGG GGTCAAGATC AACCCCTTAC AGCCTTTCAT
AAAGATCTGG CTCGTTCCAT ACAGGTGGTC TATGAGCAGG CCCTGTTTCA TATACTCAAC
CATCTGCATG GTCGCTATCG GGTCGACGCC TTGACCCTGG CCGGTGGTTG CGCCATGAAC
TCGGTGGCCA ATGGCAAAAT CACCAGTAAC ACCCCCTTTA AGCAGCTTTA TGTGCAGTCT
GCGGCGGGGG ATGCCGGTGG GGCGGTGGGG GCGGCTGTGC AGCATTGGGC GACGCATAAT
CCGCAGCAGG GGCGCTCCAT GGTTATGTCC CACGCCTACT GGGGACCCGC CTACCGGGAG
CATGATATTG CCACGCTGCT GGCAAGCCGT CAGGTGGAAA TTGCCGATCA GGGGTGTCAG
GTGCAGCAGA TGCAAGATGA GCAGCAACTG CTGAACTTTA CCGCCCAGCG TATTGCCGCA
GGCGAGGTGA TCGGCTGGTT TCAGGGGCGT ATGGAGTGGG GGCCGCGTGC CTTGGGCAAT
CGCTCCATCC TCTGTGATCC ACGCCGGGGC GATATGAAAG AGATTTTGAA TGTTAAAATT
AAACGGCGAG AGTCGTTTCG GCCTTTTGCC CCGGCCATTT TGCGTGAGGC GGTGGCCGAT
TGGTTTGAGC GGGAAGATGA GGTTCCTTTT ATGATGAAGG TGTTTCCCAT CCGAACCGAT
AAACGGGCAT TGATCCCCGC TGTGACCCAT GTGGATGGTT CTGGACGTTT GCAAACGGTG
GAGGCATCGT CCAATCCGCT CTACTACCAG TTGATCCGCC GATTTGGGGA GATAACAGGG
GTACCCATTT TGCTCAATAC CTCCTTCAAT GAAAATGAAC CGGTGGTGTG CCGTCCTGAA
GAGGCGCTTA ACTGTTATTT GCGCACCAAA ATGGATTGCC TGATTATGGG AAACTGGGTG
ATTACCCGTG AGGATGTTCC CTTGTGA
 
Protein sequence
MQVIVGINAY HADASACIVV DGRLIAAAEE ERFRRIKHWA GFPELALRYC LQAAGVALSD 
VDVVAVNTDP KANLGRKLAF TLLRWPSPAL LLDRVRSAGK RGGVAQELER LFPGTPFQGQ
VVAVEHHRAH MASAFLVSPY DKAVVLSVDG FGDFSSTVWG LGQGSDFSMD GAIHFPHSLG
IFYQALTQYL GFPNYGDEYK VMGLAPYGEP RYVDQLNKIV RLRPAGRFAL EMRYFKHHKI
PSVFAWEGGA PRVATLYNRT ALEPLLGPPR GQDQPLTAFH KDLARSIQVV YEQALFHILN
HLHGRYRVDA LTLAGGCAMN SVANGKITSN TPFKQLYVQS AAGDAGGAVG AAVQHWATHN
PQQGRSMVMS HAYWGPAYRE HDIATLLASR QVEIADQGCQ VQQMQDEQQL LNFTAQRIAA
GEVIGWFQGR MEWGPRALGN RSILCDPRRG DMKEILNVKI KRRESFRPFA PAILREAVAD
WFEREDEVPF MMKVFPIRTD KRALIPAVTH VDGSGRLQTV EASSNPLYYQ LIRRFGEITG
VPILLNTSFN ENEPVVCRPE EALNCYLRTK MDCLIMGNWV ITREDVPL