| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0920 |
|---|
| Symbol | |
|---|
| ID | 4483200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 1126235 |
|---|
| End bp | 1126714 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639721668 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_864844 |
|---|
| Protein GI | 117924227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT ATCTCAATGC CCTGATACTG CTGGCCGAAG GGGGCGATCC CGAAGCCCAG
CACCGCATTG GCGTCTACTG CCTGCAAGGG GATGAGGTAC AGCAGGATTT AGAGGGCGCA
CGACTCTGGT TTGCAGCCTC GGCTCAGCAG GGCTACGCCC CCGCCGCTTA TGATCTGGCC
CTGCTCTATC TGCAAGGCAT CGGTGGAGAG CGAGATGCAA CCACCGGATT GAGGTGGCTT
CGCCAAGCGG CTATGGCAGG GGATGCCAAA GCACAAAACA ATCTTGCCAT TCACTTACTT
AGCGGTGATG GCCAAGAGCC CGACCCCTTA CAAGCGCTGA TTTGGTTTGA ACTGGCCGCC
CGCCATGATT TGGCCGAGGC GCAAGAGAAT CTAGCGGCCC TACGCCAGGC AACCACGGCA
GAACTACAGT TCAAAGCACA GCTCGGCGTG GAGGCCATTT TGGCACAAAT GGGCCAATAA
|
|---|
| Protein sequence | MSSYLNALIL LAEGGDPEAQ HRIGVYCLQG DEVQQDLEGA RLWFAASAQQ GYAPAAYDLA
LLYLQGIGGE RDATTGLRWL RQAAMAGDAK AQNNLAIHLL SGDGQEPDPL QALIWFELAA
RHDLAEAQEN LAALRQATTA ELQFKAQLGV EAILAQMGQ
|
|---|
| |