Gene Mmc1_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0892 
Symbol 
ID4483385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1091957 
End bp1093330 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content58% 
IMG OID639721641 
Producthypothetical protein 
Protein accessionYP_864817 
Protein GI117924200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.986479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA GAAACCACGG CATGGATCCG CAACCGGCAC TTTTGATCCT CGTCTCCCAA 
GCTGGCTATC CAACCCATGC GCCGCGTATT CGTGCCCTGG GCGAGGCCAC ATCCCTCTAT
TTAGCGGGAC CTGGGCAGCT GGACCAACTG GATGGCTTGC CCTTTTTTGC CTGCGATGCC
ACCACCCCCG TAGAGAGCCT GCTGGGGGAG CTGCAAGAGC GGGGGTTTCG TCCCGACGCG
CTACTGCAAC TGGAGAGCCT GGATTTCTAC CCCCAAGGGT TGATTGGCCA GCCCCTGCCC
GCTTTTTATT ATGCTACGGA TATTCACCAA CATATCCACT GGCAAATGGA GTATGGCAAA
CTTTTTGATG CCCTGTTTAT CCCTTCGCCC CATTTTTTAG AGCCCATGCG CCGCAATGGT
CATGTGGCGG TTTATGCTGC ACCCGAGGGG GTTGATCTAA CTCTGTTTAG CAACCCCGGT
TTAAGTCGGG ATCTGGATCT GGTCTTTGTG GGCTCAACCC AAGCCGATCA ACACCCGCTG
CGACCTGTCC TGCATACCCT ACTCCGGGAC CAGGGTTATA AAATACAGTT TTCACCCCGT
GCCGATGCCG CAACCCGCGC CAAGCTCTAT GGGCGTAGCC GGGTGGTGCT GCACCAAGGC
GAACCGGGGA TCTTTAGCGC CACCCAGTTG GAGGGGGCCG CCTGTGGTGC GGTGCCCTGC
ACCACCGCCT TTAGCGGCTT GGAACCCGAG CTGCGCAGCG AACAAGAGTG CATTACCTAT
CGGGACGAAC ATGACCTACT GCATCGACTG GAGAGCCTAC TGGGCGAAGG GCCTCGCTGG
CACCAGCTCA GTGATGCCGC TCAACAACGG GTCAAACAGG CCAGCTGGGG CCAGCGCAGC
CAACAGATGC TGCAAAACAT GCTCCCCTTT CTGCGGCAAA AACGCACCCA TTTTGCTGAA
GCCGATCAGA TGAAAGCGCA CGCTTTTGTC TATCATGTGC GAGGCTTTGG GGGGCGCGGC
ATCCGCATGC TCAACACCCT CTCCAACCAA TTTCCAGAAG ATGTGGAACT CCACCTGCTC
AAGGCACTGA GCTATTTAAA CAGCAACCTC TATCTTGAGG CTGCCCGTGA ATTGGACACC
CTGCTCACCC AGGCTACGCC CCCCCCCACC GCGTTTGTGG AACAGATTGC TGACATTCTA
CTCAACACCT TTGAACTGGC CGGCCATACC GCTGGAGCGC TACACACCGC CCAGGCCTTG
AGCCTGCCCA GTGACGCCCA AAAACGACGC CTTGCGCGAC TGCTCTCCCG CACGTCGGAC
CCGCTACCCC CAGAGATTAT GGAAAAATTG CGCATCCCCG CGCAAACCGC ATAA
 
Protein sequence
MEMRNHGMDP QPALLILVSQ AGYPTHAPRI RALGEATSLY LAGPGQLDQL DGLPFFACDA 
TTPVESLLGE LQERGFRPDA LLQLESLDFY PQGLIGQPLP AFYYATDIHQ HIHWQMEYGK
LFDALFIPSP HFLEPMRRNG HVAVYAAPEG VDLTLFSNPG LSRDLDLVFV GSTQADQHPL
RPVLHTLLRD QGYKIQFSPR ADAATRAKLY GRSRVVLHQG EPGIFSATQL EGAACGAVPC
TTAFSGLEPE LRSEQECITY RDEHDLLHRL ESLLGEGPRW HQLSDAAQQR VKQASWGQRS
QQMLQNMLPF LRQKRTHFAE ADQMKAHAFV YHVRGFGGRG IRMLNTLSNQ FPEDVELHLL
KALSYLNSNL YLEAARELDT LLTQATPPPT AFVEQIADIL LNTFELAGHT AGALHTAQAL
SLPSDAQKRR LARLLSRTSD PLPPEIMEKL RIPAQTA