| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0890 |
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| Symbol | |
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| ID | 4483383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1087966 |
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| End bp | 1089741 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721639 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_864815 |
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| Protein GI | 117924198 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0212569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.465955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGCAG CATCCTTTGT TGGACGTCTT TTTCTCTTAT CCCTGCTGGC GCTCATGCTG
GGGGGGGTGA ATGTGGCCTA TGCCCTGAAA AATGACAAGG AGCCTCAACC CGATAACACC
ACCACCGCCC GTATTGAAGG GTATATGCAT ACCGATTTAA TACGGGCGGT GGCAGCTTCT
GAAGATGGTC AGTTTTTTCT CACCGCAGCC GACGACAAAA CCGCCCGTTT GTGGAACAGC
GCCGGGCAGC TGTTAAAGGT CTATCGCCCC CCCATTCATT TTGTGGAAGG GGATGGCAAA
CTGTTCGCGG GGGCGATCTC TCCCAATGGG CAGTGGGTAG CGGTCGGGGG GTGGACGGGC
TGGTCATGGG ATAAGAGCAT CTCGATCTAT ATCATGGCGG TGGCCGATGG CAAGATGGTG
CGCCGCATCA GCGATTTACC TGCCCAGATC AACCATTTGG CGTTTAATAA GGATGGTTCT
CTGCTGGCGG TGGCCTTGGG CGAAAATCAG GGGTTTAGGA TCTATCGCGC CCAAGACGGG
GTGTTGGTCG GCGGGGATAG GCGCTTTGAG GGGATCTGTA ATCGCATTGC TTTTACCCCC
GATGACGGGG TGGTGGCCAC AGCTTATGAT GGCAAAGTGC GTCTATACAG CAGCTATATC
CAACCCATTA AGGAAGTTAC GCCGATCCCA GGGGGGCAAC CCTATGGGCT GCGTTTCTCA
CCGGATGGGC GCTATCTGGC GGTTGCTTAT CGGGATCGGG CCGCCATTCA GGTGCTCTCT
GGCCGTGATC TTACCCTAAA GTATCTACCG GATATGGGGG ATATTCAAAA AGGCAGCATG
CATCTGGTGA CATGGAGCCG CGATGGGCGC TATCTCTATG GGGCCGGTAC GGCCTCGTGG
GATGGGCGGT TTTTTATTCG TAAATGGCAG CGTGGCGGTG TGCCCAATGG GGCTGCGCCA
GCCCGTTATC TGGATATTCC TGTGGGCTTT GATACGGTGA TGGCACTCAC CCCGCTGGCG
GAAGGTGCTT TGGCCTATAG CACCGCCGAC CCAGCCTTGG GCGCTCTGGA TGAGGAGGGT
TTTGTCAGCT TTTTACTCAA GCGCCCCTAT GCGGACTTTC GCGGCATGGG CGGGGCGTTC
CAGCTCTCTC AGGATGGCTC GGTGGTGCAG TTTGCCCTGG ATAGCGGAGG CAAGCGGGTG
CGTCAGTTCT ACTTTGATAG CCTGACCTTG CGTGAGAGCG AGCCCAAAGA GACCCTCTAC
AGCGCGGCCA AACAGAGCCC CCAGTTGCAG GTGGCTGCCG CTGGCCCAAC GCTACTGGTG
GACGGCAAAC TTAAACTCAA TCTGGATAAA GATGAAACGC TGGTGGCTTA CGCGCTCTCC
TTACGCATGC CGTTGCTGGC GGTGGCCACC TCTCAGGGGG TGCGCCTACA GCATGCCAAT
GGCGGGCTGT TTTGGCAGAA GAGTCTGGGT GCCGAGCCCG TTGCGATTAA CCTAACCCGG
GATGACCGAT TTGTGGTGGT GGCCGGGAGC GATGGGGTCA TTCGCTGGCT GCGGGTGCAA
GGCGGGGGCG AAGAGGTGGC GCTGTTTCCC CACCGCAATG GCAGCTCCTG GATTACCTGG
AACAGTCATG GCTATTATGC CACCTCGCCC GGGGCAGAGG GACTGCTGGG TTGGCACACC
AATGGCGATA AAGATCAGGA GGCGCGTTTT GACCCCATCT CCAACTATCG CGCCACCCGC
AACCGTCCTG AGCAGCTGAT GGGGGTGTTC AAGTAA
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| Protein sequence | MYAASFVGRL FLLSLLALML GGVNVAYALK NDKEPQPDNT TTARIEGYMH TDLIRAVAAS
EDGQFFLTAA DDKTARLWNS AGQLLKVYRP PIHFVEGDGK LFAGAISPNG QWVAVGGWTG
WSWDKSISIY IMAVADGKMV RRISDLPAQI NHLAFNKDGS LLAVALGENQ GFRIYRAQDG
VLVGGDRRFE GICNRIAFTP DDGVVATAYD GKVRLYSSYI QPIKEVTPIP GGQPYGLRFS
PDGRYLAVAY RDRAAIQVLS GRDLTLKYLP DMGDIQKGSM HLVTWSRDGR YLYGAGTASW
DGRFFIRKWQ RGGVPNGAAP ARYLDIPVGF DTVMALTPLA EGALAYSTAD PALGALDEEG
FVSFLLKRPY ADFRGMGGAF QLSQDGSVVQ FALDSGGKRV RQFYFDSLTL RESEPKETLY
SAAKQSPQLQ VAAAGPTLLV DGKLKLNLDK DETLVAYALS LRMPLLAVAT SQGVRLQHAN
GGLFWQKSLG AEPVAINLTR DDRFVVVAGS DGVIRWLRVQ GGGEEVALFP HRNGSSWITW
NSHGYYATSP GAEGLLGWHT NGDKDQEARF DPISNYRATR NRPEQLMGVF K
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