Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0883 |
Symbol | |
ID | 4483376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1080338 |
End bp | 1081186 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721632 |
Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
Protein accession | YP_864808 |
Protein GI | 117924191 |
COG category | [C] Energy production and conversion |
COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.243145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CACTACCAGG ACCCACTAAA AAATTGCGGG TGGGCATCTA CTCCTTCACC GGGTGTGCGG GGGATCAGTT GGCCATTCTC AATGATACAA CGGTGCTGTT GGGTTTGGCC CAGCGGGCGG AGATCTGCTC CTTTATTATG GCCAGCTCAC AGGAGAGTGA TCAGGAGGGG CGGCTGGATT TGGCCATTGT GGAGGGCTCA ATCTGTTCGG AGCAAGAGCG CACTGCCCTC GAAAAATTAC GGCAGCGCAG CGATGCTCTT ATGGCGCTTG GGACCTGTGC GGTGTGGGGG GGGCTGCCCG CGATGAACGC CAAAACCATC CCCATCCATA CCATGAAAGA GCAGGTTTAT GGCGACAGTA CGGTCTTTCC GGGTGCCCGT GAGGCTGAGC CGCTCTCTCG CTTTGTAAAA GTGGATTATG CGGTAACGGG GTGCCCCATT GAGATAGATG AGTTTGCCCA GGTTGTGACG GCCATCTTAA ATGGGGTGCG GCCCGTGCAA ACGGATGCTT CCGTCTGTTC GGAGTGTCGT ATAGCAGAGA ACCGTTGTCT GGTGCAGGCT GAGCGGCGGG TTTGCTGTGG TCCCATCACC TTGGCGGGGT GTAAGGCGCG TTGCATACAG TATGGTCAAC CCTGTTATGG GTGTCGGGGG CCGGTGGAGG ATCCCGCCTA TGTGGCTACG GCGCGGCTCT TTAGTGATCA TGGTCTGAAT AAAGGGGCGG TGATTGAGCA GATCCGCCGA TTTACCGCCC CGGCTTGGGT GGAGAATCGG TTGATTCCCC ACTATCAAGA TCCACAACAT ATGGGCCTGG GCCAGCAGCC TGAAGGGGAT GCGCCATGA
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Protein sequence | MSKPLPGPTK KLRVGIYSFT GCAGDQLAIL NDTTVLLGLA QRAEICSFIM ASSQESDQEG RLDLAIVEGS ICSEQERTAL EKLRQRSDAL MALGTCAVWG GLPAMNAKTI PIHTMKEQVY GDSTVFPGAR EAEPLSRFVK VDYAVTGCPI EIDEFAQVVT AILNGVRPVQ TDASVCSECR IAENRCLVQA ERRVCCGPIT LAGCKARCIQ YGQPCYGCRG PVEDPAYVAT ARLFSDHGLN KGAVIEQIRR FTAPAWVENR LIPHYQDPQH MGLGQQPEGD AP
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