Gene Mmc1_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0876 
Symbol 
ID4480425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1071772 
End bp1072572 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID639721624 
Producthypothetical protein 
Protein accessionYP_864801 
Protein GI117924184 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000358269 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0734484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGTG ATATGGAACG TGTGGTTCTC ATAACAGATT TTGGGGTAAA TGATCTCTAT 
GTCGGCCAAT TAAAAGGGGT TCTCTGTGGC GCTTCCATGG AGATACAGAT CATAGATTTT
TTTCATGATA TTCCTCCCTT TAACATAGAG AGTGCTGCTT GGCTCATTTC ACGATGCCAA
CACTATTTTC CACCAAAGAG TCATTGGATC TGTGTGGTAG ACCCTGGCGT GGGTACGCCA
AGAGAAGCGC TTTTGGTCAA ATTGGGGGAG CGGGTTTTTA TTGGGCCTGA TAATGGAATA
TTGGGGTGGG CATTAAGTCA GGAGGATGCT CAGGTTCACC GTATTGGCAC CCATTGGAAA
CCGGCTTCAG CAACCTTTCA TGGGCGCGAT CTGTTTGCCC CAGTGCTTGT GGATTGGTTG
AATTATCGAG ACCTAAACCG TATTGGACCC GCGATTCAAG TGGCACAGTG CCAGCCTATG
CCGGCCTTAT TGATAAAAAA ACCGCATGGC GCACAGGTTA AGATCACCCA CATTGATCGT
TTTGGAAATG TCGTAACTGC TTTAAAATAT ATTGATATTT GTTGGGCATC CGCTGCGCTC
GTAGTCAATG GGATTTCGAT CACAAAATGG GTAAAAACCT TCGCAGATCT TAGGGTTGGT
GAGGTTGGAA TGTTGGTTGG AGGGTTTGGA ACGGTTGAAA TTGTGGCAAA TAAAGCCCAT
GCAGCCAGCA TGCTTTCATG TAAATGTGGC GATTGGGTGG ATTTTTTAGA AAAAAGCGTT
GACGCTAAAA ATGGCGACTG A
 
Protein sequence
MKSDMERVVL ITDFGVNDLY VGQLKGVLCG ASMEIQIIDF FHDIPPFNIE SAAWLISRCQ 
HYFPPKSHWI CVVDPGVGTP REALLVKLGE RVFIGPDNGI LGWALSQEDA QVHRIGTHWK
PASATFHGRD LFAPVLVDWL NYRDLNRIGP AIQVAQCQPM PALLIKKPHG AQVKITHIDR
FGNVVTALKY IDICWASAAL VVNGISITKW VKTFADLRVG EVGMLVGGFG TVEIVANKAH
AASMLSCKCG DWVDFLEKSV DAKNGD