| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0872 |
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| Symbol | |
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| ID | 4480421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1067659 |
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| End bp | 1068681 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639721620 |
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| Product | DNA-directed RNA polymerase, alpha subunit |
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| Protein accession | YP_864797 |
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| Protein GI | 117924180 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000175135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0357315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGGA ATTGGACTGA GCTGATCAAG CCTCACACCA TTGAACTGGG TGGGGATGAA
ACTGAAATTC AGCGTAAGGC AACATTGGTT GCTGAACCGC TCGAACGGGG TTTCGGTACG
ACTTTGGGTA ACGCATTGCG TAGAGTGCTG CTCTCTTCTT TGCAAGGTGC AGCGGTAAGT
ACTGTTCGCA TTGAGGGTGT ACTACATGAA TTTTCTAGTG TACCCGGTGT TATCGAAGAT
GTAACCGATA TCATTCTGAA CATTAAAGGG TTGGCACTCC GTATGGAGTC CACAGGTATT
AAAAATATCT ATCTTCGGGT AGATAAAGAA GGACCTGTGA CGGCCGGCAT GATTGAGTGT
GAGACAGGGA TTGAGATTCT TAATCCTGAT CACCACATTG CAACCCTGAA TAAAAGTGGC
ACCTTGGATA TCACCATGAC CGTTACCACT GGTAAAGGTT ATGTACGTGC ACAGCTTAAT
CGTGAAGATG AAAGCTACGC CATTGGTGAT ATTCCCATTG ATGCAAGCTA TAACCCAGTC
AAGAAAGTGG CTTACCGGGT GGAAAACGCT CGTGTGGGTC AGCAGACGGA CTATGACAAG
CTGATTATGG ATATTGAAAC CAACGGTGTG GTAACCCCTG AGGATGCCCT GGCGTTGGCG
GCTAAAATTC TACAAGATCA GTTAAACCCC TTCATCAATT TTGATGATGT GCCGACGGCA
CATGATCATG AAATGGAGGA TCGGCCCCAG TGGAATCCTA ACCTTTTCCG CAAGGTGGAT
GAGCTGGAAC TTTCGGTACG TAGTGCCAAC TGCCTTAAAA ACGATGATAT CGTTTATATT
GGTGATTTGG TGCAAAAAAG CGAATCCGAG ATGCTCAAGA CGCCAAACTT TGGTCGTAAG
TCTCTGAATG AGATCAAAGA AGTCTTGGAT GAAATGGGGC TGTCGCTGGG TATGACGTTG
GATACCTGGC CTCCTGAGAA CATCGACGAT CTGTCTAAGC AGTTCGAAGA AGAGAACTTT
TAA
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| Protein sequence | MYRNWTELIK PHTIELGGDE TEIQRKATLV AEPLERGFGT TLGNALRRVL LSSLQGAAVS
TVRIEGVLHE FSSVPGVIED VTDIILNIKG LALRMESTGI KNIYLRVDKE GPVTAGMIEC
ETGIEILNPD HHIATLNKSG TLDITMTVTT GKGYVRAQLN REDESYAIGD IPIDASYNPV
KKVAYRVENA RVGQQTDYDK LIMDIETNGV VTPEDALALA AKILQDQLNP FINFDDVPTA
HDHEMEDRPQ WNPNLFRKVD ELELSVRSAN CLKNDDIVYI GDLVQKSESE MLKTPNFGRK
SLNEIKEVLD EMGLSLGMTL DTWPPENIDD LSKQFEEENF
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