| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0869 |
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| Symbol | rpsM |
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| ID | 4480418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1066186 |
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| End bp | 1066554 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721617 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_864794 |
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| Protein GI | 117924177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000182214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00600411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGCCCGTA TTGCTGGTGT TAACATACCT GTTAACAAGC GCGTTGAAAT CGCGCTCACT
TACATCTACG GCATCTGTCG CGACAGTGCC AAGCGAATCA CCAAAGAGGC GGGCATTGAG
CCCCAGGTTC GCGTGTCTGA TCTGACTGAT GCTGAAGTTG CGCAACTGCG TGACATCATC
GACAACAACC ATACGGTTGA AGGTGATCTG CGCCGTCAGA TCGCCATGAA TGTCAAGCGT
CTGATGGACC TAGGTTGCTA CCGTGGTCTG CGCCACCGTC GGGGCTTGCC CTGTCGCGGT
CAGCGCACTC ATACGAATGC ACGCACCCGT AAGGGTCCAC GTAAGCCCAT TGCGGGCAAG
AAGAAATAA
|
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| Protein sequence | MARIAGVNIP VNKRVEIALT YIYGICRDSA KRITKEAGIE PQVRVSDLTD AEVAQLRDII
DNNHTVEGDL RRQIAMNVKR LMDLGCYRGL RHRRGLPCRG QRTHTNARTR KGPRKPIAGK
KK
|
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