Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0859 |
Symbol | rplE |
ID | 4481066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1061171 |
End bp | 1061728 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639721607 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_864784 |
Protein GI | 117924167 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000246885 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.001984 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATC TGAAACAGGT TTACCATGAC AAGGTGGTAC CCGAACTCCA AGCGAAGTTC GGCTACTCCA ACGTCATGCA GGTGCCACGC TTACAGAAGA TCGTGGTGAA CATGGGCGTC GGCGAGGCAA TTGCTGATAA AAACTTTTTG AATAACGCTA TTGGCAACCT AGAGGCGATT ACGGGTCAGA AGGCTCAGAC CACTTACGCC AAAAAGTCCA TCGCTGGTTT TAAACTGCGT GAAGGACAAG CGGTTGGTTG CCGTGTTACG TTACGTCGTC GGCAGATGTG GGAATTCCTT GATCGTTTGA TCAATGCAGC CCTGCCCCGG GTACGTGACT TCCGTGGTGT CAGTGAAAAG GCCTTTGATG GTCGCGGCAA CTACACCATG GGCATCAAAG AACAGATTAT CTTCCCCGAG ATCGATTACG ACAAAGTCGA TAAGGTCCGT GGTATGGATA TCTGCATTGT GACCAGTGCC AAGACCGATG ATGAAGCCCG CCAGCTTCTC GCAGGCTTCA ACATGCCGTT CAGGAAGAAG GAGGGGAACA ATGGCTAA
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Protein sequence | MADLKQVYHD KVVPELQAKF GYSNVMQVPR LQKIVVNMGV GEAIADKNFL NNAIGNLEAI TGQKAQTTYA KKSIAGFKLR EGQAVGCRVT LRRRQMWEFL DRLINAALPR VRDFRGVSEK AFDGRGNYTM GIKEQIIFPE IDYDKVDKVR GMDICIVTSA KTDDEARQLL AGFNMPFRKK EGNNG
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