Gene Mmc1_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0859 
SymbolrplE 
ID4481066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1061171 
End bp1061728 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID639721607 
Product50S ribosomal protein L5 
Protein accessionYP_864784 
Protein GI117924167 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000246885 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.001984 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATC TGAAACAGGT TTACCATGAC AAGGTGGTAC CCGAACTCCA AGCGAAGTTC 
GGCTACTCCA ACGTCATGCA GGTGCCACGC TTACAGAAGA TCGTGGTGAA CATGGGCGTC
GGCGAGGCAA TTGCTGATAA AAACTTTTTG AATAACGCTA TTGGCAACCT AGAGGCGATT
ACGGGTCAGA AGGCTCAGAC CACTTACGCC AAAAAGTCCA TCGCTGGTTT TAAACTGCGT
GAAGGACAAG CGGTTGGTTG CCGTGTTACG TTACGTCGTC GGCAGATGTG GGAATTCCTT
GATCGTTTGA TCAATGCAGC CCTGCCCCGG GTACGTGACT TCCGTGGTGT CAGTGAAAAG
GCCTTTGATG GTCGCGGCAA CTACACCATG GGCATCAAAG AACAGATTAT CTTCCCCGAG
ATCGATTACG ACAAAGTCGA TAAGGTCCGT GGTATGGATA TCTGCATTGT GACCAGTGCC
AAGACCGATG ATGAAGCCCG CCAGCTTCTC GCAGGCTTCA ACATGCCGTT CAGGAAGAAG
GAGGGGAACA ATGGCTAA
 
Protein sequence
MADLKQVYHD KVVPELQAKF GYSNVMQVPR LQKIVVNMGV GEAIADKNFL NNAIGNLEAI 
TGQKAQTTYA KKSIAGFKLR EGQAVGCRVT LRRRQMWEFL DRLINAALPR VRDFRGVSEK
AFDGRGNYTM GIKEQIIFPE IDYDKVDKVR GMDICIVTSA KTDDEARQLL AGFNMPFRKK
EGNNG