Gene Mmc1_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0849 
Symbol 
ID4481056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1057057 
End bp1057356 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content52% 
IMG OID639721597 
Product50S ribosomal protein L23P 
Protein accessionYP_864774 
Protein GI117924157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000828313 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000112275 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGATT TGAGAATGTA CAACGTTCTG GTGCGCCCGC TGGTGACTGA AAAGTCCACC 
ATGCAGTTGG AGAAGGGCAA CCAAATCAGC TTTGCCGTCG CCACATGGGC CAATAAACCC
CAGATTAAAA AAGCGATCGA GACCATCTAT AGCGTCAAAG TAGAGGCGGT ACAGGTGAGC
AACGCCAAGG GTAAAACCAA GCGTTTTGGT AAGCTTGAAG GCAAGCGCAA GGATTGGAAG
CGGGCCGTGG TTCGTCTCCA AGAGGGTCAA TCCATCGACC TGTTCGATCA GGGCGCCTGA
 
Protein sequence
MNDLRMYNVL VRPLVTEKST MQLEKGNQIS FAVATWANKP QIKKAIETIY SVKVEAVQVS 
NAKGKTKRFG KLEGKRKDWK RAVVRLQEGQ SIDLFDQGA