Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0844 |
Symbol | |
ID | 4483424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1051998 |
End bp | 1054076 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639721592 |
Product | translation elongation factor 2 (EF-2/EF-G) |
Protein accession | YP_864769 |
Protein GI | 117924152 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0265516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000171204 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCTCGAG AAATTGCCCT GGATCACGTA CGTAATATTG GCATCATGGC CCATATTGAT GCCGGTAAAA CGACAGTAAC GGAACGGATT CTCTACTACA CCGGTCGTTC GCATAAGATT GGTGAAGTTC ATGAGGGCGC TGCCACCATG GACTGGATGG AGCAAGAGCA AGAGCGTGGC ATTACCATCA CCTCTGCGGC TACCACTTGT TTCTGGAAAG AGCACCGCAT CAATATTATC GACACCCCCG GCCACGTTGA CTTTACCATT GAGGTAGAGC GTTCTTTGCG TGTCTTGGAT GGTGCCGTAG CGGTTTTCTG TGGTGTGGCC GGTGTGCAGC CCCAGTCAGA AACTGTGTGG CGCCAGGCTG ATCGCTATGG TGTACCCCGT TTGGCCTTCG TGAATAAGAT GGACCGTATG GGTGCCGACT TTAATAAAGC GGTGCAAACC ATGAAGGACC GTCTGAAGGC ACGTGCGATC CCTGCTCAGT ACCCCATCGG TGCTGAAGAA GATCTGCGCG GCATGGTGGA CTTGATCACC CGCAAGGCCT ATATTTTCAA CGATGAATCC CTGGGTGCAG AGTTTGAAGT ACTGGATTGC CCTGAGGATA TTGAGGCTGA AGTCGAAGAA GCTCGTGAAG CGCTGTTAGA GGCCGCTTTG GAGCAAGATG ACACCTTAAT GGAAAAATAT CTGGAAGGTG AAGAGATCAC CATTGCAGAG TTTAAATCCT GCATGCGTCG TGCGGTTATC TCTAGCGCGT TTGTACCTGT GTTCTGTGGA TCTGCCTTCA AAAACAAGGG CGTTCAACTT CTCTTGGATG CCGTTGTCGA TTATTTCCCC TCACCTTCTG ATACCCCCTA CATCGAAGGG TTGTTGCCTG ATAGTGAAGA AGCAGCCGTG CGTAAGCCTT CGGATGAAGA GCCTTTCGCC GCGTTGGCCT TTAAAATCAT GACCGATCCC TTTGTCGGTA CCTTGACCTT TGTACGTGTC TACTCCGGTG TTATGGAATC GGGTACCAGT GTTCTTAATG CCTCCAAAGA TCGTAAAGAG CGCATCGGTC GTTTGATGTT GATGCACGCC AACAAGCGTG AAGACATTAA AGAAGTGCGT GCTGGGGATA TCTGTGCCGT GGTTGGTTTG AAAAATACCA CCACAGGTGA AACTCTCTGC GATCCAAATA AGCCGATCAT TCTTGAAAAA ATGGATTTCC CAGCACCGGT TATCGCCATT GCTGTGGAGC CCAAGACCAA AGCTGACCAA GAGCGTATGG GTGTGGCCCT TCAGCGTTTG GCTCAAGAAG ACCCCTCTTT CCGGGTTGAG GTCGACCATG AGACCAACCA GACCATTATC TCAGGTATGG GTGAGCTGCA CCTAGAGATC ATCGTCGACC GTATGATGCG CGAATTCAAG GTTGATGCAA ACGTCGGTCA GCCTCAAGTG GCCTACCGTG AGACCATTAC CCAAATGGTT GAGCATGAAT CTAAGTTTGT ACGTCAGTCC GGTGGTCGTG GTCAGTTTGG TCATGTGTGG TTGCGTTTAG AGCCCAACGA ACCAGGTGCT GGTTACGAGT TTGTGGATGG CATTAAGGGT GGGGTTGTAC CTAAAGAGTA TATTCCAGCC GTCAAAAACG GTGTGGGTGA AGCCATGGCC AATGGTGTCT ATGTTGGCTT CCCCATGGTC GATGTCAAAG TGACCCTGTT TGATGGTTCA TACCATGAAG TTGACTCCTC TGAGATGGCC TTTAAAATCG CCGGTTCGAT GGGTCTCAAA GAGGGCGCCA TGAAAGCCAA GCCCGTATTG CTTGAGCCCA TCATGGATGT TGAAGTTGAG ACGCCTGAAG ATTACATGGG GGATGTCATG GGTGACATGA ACTCCCGCCG TGGTCAGATC CAAGGTATGG AAGATTCTGG CAATAACAGG TTGGTCAAGG CACAAGTGCC TTTGTCCGGC ATGTTTGGTT ACGCGACAGA CTTGCGTTCA ATGAGTCAGG GGCGTGCGAC CTTTACCATG CAGTTTGGCC ACTATGCCCA GGTGCCTAAA TCCATTGCAG AAGAGATCAA GGCCAAAACC ACCGGTTAA
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Protein sequence | MAREIALDHV RNIGIMAHID AGKTTVTERI LYYTGRSHKI GEVHEGAATM DWMEQEQERG ITITSAATTC FWKEHRINII DTPGHVDFTI EVERSLRVLD GAVAVFCGVA GVQPQSETVW RQADRYGVPR LAFVNKMDRM GADFNKAVQT MKDRLKARAI PAQYPIGAEE DLRGMVDLIT RKAYIFNDES LGAEFEVLDC PEDIEAEVEE AREALLEAAL EQDDTLMEKY LEGEEITIAE FKSCMRRAVI SSAFVPVFCG SAFKNKGVQL LLDAVVDYFP SPSDTPYIEG LLPDSEEAAV RKPSDEEPFA ALAFKIMTDP FVGTLTFVRV YSGVMESGTS VLNASKDRKE RIGRLMLMHA NKREDIKEVR AGDICAVVGL KNTTTGETLC DPNKPIILEK MDFPAPVIAI AVEPKTKADQ ERMGVALQRL AQEDPSFRVE VDHETNQTII SGMGELHLEI IVDRMMREFK VDANVGQPQV AYRETITQMV EHESKFVRQS GGRGQFGHVW LRLEPNEPGA GYEFVDGIKG GVVPKEYIPA VKNGVGEAMA NGVYVGFPMV DVKVTLFDGS YHEVDSSEMA FKIAGSMGLK EGAMKAKPVL LEPIMDVEVE TPEDYMGDVM GDMNSRRGQI QGMEDSGNNR LVKAQVPLSG MFGYATDLRS MSQGRATFTM QFGHYAQVPK SIAEEIKAKT TG
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