Gene Mmc1_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0843 
Symbol 
ID4483423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1051449 
End bp1051919 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID639721591 
Product30S ribosomal protein S7 
Protein accessionYP_864768 
Protein GI117924151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00121052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000363521 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACGAC GTCGTGAAGT GCCCAAGCGC GAGGTGATCC CAGACGCGCG TTATAATGAT 
AAGCTTGTCG CCAAGTTTAT GAACTGTCTT ATGGTAGACG GCAAAAAGTC GCTTGCTGAG
CGTGTCTTCT ACGGTGCCTT TGATTTGATC GAACAGCGCA CAAAAGAAGA TCCCATCAAG
GTGTTTAAAG AGGCTGTGGA CAATGTGCGT CCGACGCTTG AAGTGCGCTC CCGCCGTGTT
GGTGGTGCCA ACTATCAGGT GCCGGTTGAG GTGCGCCCTG TGCGTCGTCA GACTTTGGCC
ATTCGTTGGT TGATTGGTTA TGCACGGTCC CGTGGTGAAA AAACCATGCG TGAGCGTTTA
GCCGCCGAGT TGATCGAGGC TTCTCAGGGC CGTGGTGCGA CCATCAAGAA GCGCGACGAT
ACGCATCGTA TGGCCGAAGC CAACAAGGTG TTTGCGCACT ACCGTTGGTA A
 
Protein sequence
MSRRREVPKR EVIPDARYND KLVAKFMNCL MVDGKKSLAE RVFYGAFDLI EQRTKEDPIK 
VFKEAVDNVR PTLEVRSRRV GGANYQVPVE VRPVRRQTLA IRWLIGYARS RGEKTMRERL
AAELIEASQG RGATIKKRDD THRMAEANKV FAHYRW