Gene Mmc1_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0839 
Symbol 
ID4483419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1041544 
End bp1041915 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content50% 
IMG OID639721587 
Product50S ribosomal protein L12P 
Protein accessionYP_864764 
Protein GI117924147 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.12937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0961765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG AAGAAATGAT TTCCGCTATT GAATCCATGA CCGTTCTGGA GCTTTCTGAG 
CTGGTTAAAG CTTTGGAAGA GAAGTTCGGC GTATCGGCTG CCGCTCCTGT TGCGGTTGCT
GCTGCGGTTG GTGGTGGCGA AGCCGTTGTT GAAGAAGCCA AAACCGAATT TGACGTGATC
TTGGCCAGTG CTGGCGACAA GAAAATTCAC GTCATTAAAG CCGTGCGTGA AATGACCGGT
CTGGGCCTGA AAGAGGCTAA AGATCTGGTT GAAGGGGCAC CTAAAGCGGT TAAAGAAGCT
GTTTCTAAAG ATGAGGCCGA CAAGCTTAAG GCCAAATTGG AAGAAGCCGG CGCCGTGGTG
GAAATTAAGT AA
 
Protein sequence
MTQEEMISAI ESMTVLELSE LVKALEEKFG VSAAAPVAVA AAVGGGEAVV EEAKTEFDVI 
LASAGDKKIH VIKAVREMTG LGLKEAKDLV EGAPKAVKEA VSKDEADKLK AKLEEAGAVV
EIK