| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0836 |
|---|
| Symbol | |
|---|
| ID | 4483416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1039544 |
|---|
| End bp | 1039972 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721584 |
|---|
| Product | 50S ribosomal protein L11P |
|---|
| Protein accession | YP_864761 |
|---|
| Protein GI | 117924144 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0080] Ribosomal protein L11 |
|---|
| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00174211 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0898369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA AGATTACAGC TTATATCAAG TTACAGTGCC CCGCTGGTGC TGCTAAGCCA
AGCCCCCCGG TGGGTCCTGC GCTGGGTCAG CATGGTCTGA ACATTATGGA GTTCTGTAAA
GCGTTTAACG CACAGACCGC CAATATGGAA CCAGCCAGCC CTGTGCCCGT GCTCATTTCG
GTCTATGCGG ACCGTACCTT CAGCTTTGAG TTGAAGACCC CTCCAGCCTC CTACTTCCTG
AAAAAGGCCG CGGGCCTGCA GGGCGGTAGC AAAGCCCCCA ACCGTGACCC CGCAGTGGGC
AAGGTTACTT GGGCGCAGGT TGAAGAGATC GCCAAAGCCA AGATGGTGGA TCTAAACGCC
AACGATATTG AAGCAGCAAA GAAAATCATT GCTGGTTCAG CCAACTCCAT GGGCTTGGAA
GTGGTGTAA
|
|---|
| Protein sequence | MAKKITAYIK LQCPAGAAKP SPPVGPALGQ HGLNIMEFCK AFNAQTANME PASPVPVLIS
VYADRTFSFE LKTPPASYFL KKAAGLQGGS KAPNRDPAVG KVTWAQVEEI AKAKMVDLNA
NDIEAAKKII AGSANSMGLE VV
|
|---|
| |