Gene Mmc1_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0835 
Symbol 
ID4483415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1038977 
End bp1039507 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content48% 
IMG OID639721583 
Producttranscription antitermination protein nusG 
Protein accessionYP_864760 
Protein GI117924143 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000261776 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0934709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA GATGGTATGT AATTCACGCC TATTCAGGCT TTGAAAAACG GGTTAAGAGC 
TCCTTGGAAG AAAAGGTGCG TCTTACCGGA ATGTCAAAAT ATTTTGATGA GATTCTGGTT
CCGTCAGAAG AGGTTATTGA ACTGCGCAAG GGTGCAAAAG TAACCTCTGA GCGTAAGTTT
TTTCCTGGCT ACGTGCTGGT TAAAATGGAC CTGAATGACG AAACATGGCA TCTGGTTAAA
GATATACCGA AAGTGGCGGG CTTCTTGGGT GGTGGTGGGC GGCCACAGCC CCTTTCGGAT
CGTGAGGTTG AAAAAATTCT ACAGCAAGTT GAAACCGGCA TGGAGAAACC CAAGCCGAAG
GTTAGCTTCG CTGTAGGTGA GCAGGTACGA GTGACCGATG GTCCTTTTGT ATCCTTCAAC
GGTGTCGTTG AAGAGGTGGA GGAGGATAAG TCACGCCTGA AGGTATCCGT AAGCATTTTT
GGACGGGCGA CCCCGGTGGA ACTGGATTTC ATCCAGGTTG AGAAGATTTG A
 
Protein sequence
MSKRWYVIHA YSGFEKRVKS SLEEKVRLTG MSKYFDEILV PSEEVIELRK GAKVTSERKF 
FPGYVLVKMD LNDETWHLVK DIPKVAGFLG GGGRPQPLSD REVEKILQQV ETGMEKPKPK
VSFAVGEQVR VTDGPFVSFN GVVEEVEEDK SRLKVSVSIF GRATPVELDF IQVEKI