| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0830 |
|---|
| Symbol | |
|---|
| ID | 4480867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1034006 |
|---|
| End bp | 1035568 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639721574 |
|---|
| Product | Mg chelatase, subunit ChlI |
|---|
| Protein accession | YP_864755 |
|---|
| Protein GI | 117924138 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0606] Predicted ATPase with chaperone activity |
|---|
| TIGRFAM ID | [TIGR00368] Mg chelatase-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0122975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.219751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGA TTGACTGGGA TGGTCTACTA ATGCTGGCCC GTATTTATAG TATCGCGTTA
GAGGGGGTGT CGGCCCAGAC CGTGGAGGTG GAGGTGGATC TTGCCAATGG TCTGCCGAGC
CTGAATATGG TGGGTTTGCC TGAGGGCGCG GTGCGCGAAG CCAAAGACCG GGTACGTGCT
GCGCTGAAAA ACGGGGGGTG GCAGATCCCC CCTAAGCGGG TCACCATTAA TTTGGCACCG
GCCAACCTAC CCAAAAGTGG TTCACTGTAC GATCTGCCCA TGGCCGTGGG CATGTTGTGC
GCCATGGGTG TGTTGGCGCA AGAGGCCCTG CAACAGACAC TGCTGCTGGG TGAGCTGGCA
CTGGATGGGC GGGTTAAACC GGTGCCTGGA TGCATGCCCG CCGCTTTGCT GGCCAAACGT
GCTGGGTATG CGCAATTGGT GGTGCCCATG GCGAATGCCC CCGAGGCTGC ACTGGTTGCC
GGGGTGACGG TGATTGCGGT GGAGAATCTG GCTCAATTGG TGGCCCACTT GCGGGGGGAG
GGGGTGATTG TTCCGCATCA GGTACAACAT GATCCTTTGG CGCAAGCTTG CCACCGTGAG
GCTCATGTGG ATTTTGCTGA AATCAAAGGG CAAGCCCACG CCAAACGGGC GTTAGAGATT
GTGGCAGCGG GCGGGCATAA TATTTTGATG AGCGGCCCCC CCGGTTCGGG CAAATCCATG
CTGGCCCGTG CACTGATCTC GATTTTACCC CCGCTCTCGC TGGATGAGCT GCTCGAGGTT
TCGGCCGTCT ATTCGGTGGC TGGTCGATTG GATGCCCAGC AACCATGGGT GGCCGAGCGG
CCTTTTCGGG CACCGCATCA CACCGCTTCC TCGGTGGCGC TGGTGGGGGG AGGGTCCATA
CCAAAACCCG GCGAGGTAAG TCTCGCCCAC CATGGCGTGC TGTTTTTGGA TGAGTTACCC
GAATATAAGC GCAATGTGCT TGAGGCACTG CGTGAGCCGT TGGAAACAGG GGATGTTACC
ATCGCACGGG CCAGTCGTTC CGCCAACTAC CCAGCCAAAT TTCAGCTCGT ATGTGCCTGT
AACCCCTGTC CATGCGGCCA TTTGGGAGAT AGCCGCCATC GCTGTGGCTG CCGTCCTGAT
GAGATCCAGC GCTATCAAGG ACGCCTTTCC GGTCCACTGC TGGATCGTAT TGATCTGCAC
TTGGAGGTCC CCCCAGTGGC ATGGGAGCAA CTGTCGAGCA ATCAGTCCGA GGAGCGTTCA
CAAACAATCC GCCAGCGCAT TGCAGTGGGA CGCCAACAAC AGTTTGCACG TAATGGCGAT
GGGGTGGTGA ATGCACGGTT GAGCGGGCGT CAATTAGAGA AATGGGCCGC ACTCGATGCG
CCTTGCCGTA CATTGCTGGC ACAAGCGGCC AAGCAACTGG GCTTTTCGGC GCGGGCTTAT
CACCGTATCC AGAGACTTGC CCGTACCATC GCGGATCTGG AGGGTGCCAC AGAGATACAG
CCAGCCCATT TGGCAGAAGC CATTCAATAT CGGGTCACGC TCAAGGATCG ACGTCCGACT
TAG
|
|---|
| Protein sequence | MAWIDWDGLL MLARIYSIAL EGVSAQTVEV EVDLANGLPS LNMVGLPEGA VREAKDRVRA
ALKNGGWQIP PKRVTINLAP ANLPKSGSLY DLPMAVGMLC AMGVLAQEAL QQTLLLGELA
LDGRVKPVPG CMPAALLAKR AGYAQLVVPM ANAPEAALVA GVTVIAVENL AQLVAHLRGE
GVIVPHQVQH DPLAQACHRE AHVDFAEIKG QAHAKRALEI VAAGGHNILM SGPPGSGKSM
LARALISILP PLSLDELLEV SAVYSVAGRL DAQQPWVAER PFRAPHHTAS SVALVGGGSI
PKPGEVSLAH HGVLFLDELP EYKRNVLEAL REPLETGDVT IARASRSANY PAKFQLVCAC
NPCPCGHLGD SRHRCGCRPD EIQRYQGRLS GPLLDRIDLH LEVPPVAWEQ LSSNQSEERS
QTIRQRIAVG RQQQFARNGD GVVNARLSGR QLEKWAALDA PCRTLLAQAA KQLGFSARAY
HRIQRLARTI ADLEGATEIQ PAHLAEAIQY RVTLKDRRPT
|
|---|
| |