| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0823 |
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| Symbol | |
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| ID | 4480860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1026470 |
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| End bp | 1027579 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721567 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_864748 |
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| Protein GI | 117924131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.80837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGC AATGCGGCAT CGTCGGCCTA CCCAATGTTG GTAAATCCAC AACCTTTAAC
GCCCTAACCG CAGCGGGTGC CGAATCGGCC AACTATCCGT TTTGCACCAT CGAACCCAAC
GTGGGGGTGG TGGTGGTACC GGATCCCCGC TTAGATGCTT TGTCTGCCAT TGTTAACCCC
CAGCGGGTAC TGCCCACCAC CATGGAGTTT TTGGACATTG CCGGTTTGGT GGCGGGGGCC
AGCAAGGGCG AGGGGCTGGG CAACCAATTT TTGGGGCATA TTCGGCAGGT GGATGCCATT
GTGCATCTGG TGCGTTGTTT TGAGGATGAT GATATCACCC ATGTAGCCAA CAGCATTGAT
CCGCTGCGGG ATATTGAGAT TATTGATACC GAACTGATTT TAGCCGATAT GGCCAGTGCA
GAAAAGCGCT ACAACAGCGT GGTGAAAAAA GCCAAAAGTG GCGATAAAGA GTCTAAAATT
CAGGCGGATG CATTGGAAAA AGTGATCGCG GGCTTTAATG CGGGTAAGCC CATGCGTAAC
CTGGACCTTA GTAAAGAGGA ACAAGCGACC CTTGCAGAGC TGTTTTTTCT GACCAACAAG
CCGGTACTCT ATCTGTGCAA TGTGTCGGAA TCCCTGGTGG CGGCGGCGCA GACCCCTGGC
TCCCACGCGC TGGTGGATCA GGTGCGCGAG CATGCCAAAG GGGAGGGGGC AGAAGTGGTG
GCTGTGTGCG GCTCCATTGA GGCAGAGATC GCCGAGTTGG AGGGGGATGA AAAGGCTGCC
TTCTTAGAAG ATTTGGGGCT GCACGAGTCG GGATTGGATC GCCTTATCCA AGCGGCCTAT
CGGTTGCTGG GATTACAGAC CTATTTTACG GCGGGTGTTA AAGAGGTGCG CGCTTGGACG
GTCAAACAGG GTGCAACGGC TCCCGAAGCT GCGGGGGTAA TCCATACCGA TTTTCAAAAG
GGCTTTATTC GGGCCGAAGT AACCAGCTAC GACGATTTTA TTGCCTGTAA GGGCGAGGCC
GGGGCGAAAG AGAAGGGTAA GCTACGCCTT GAGGGTAAAG AGTATCGGGT GGCTGATGGG
GATGTCATGC ATTTCCGCTT TAATGTGTAA
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| Protein sequence | MALQCGIVGL PNVGKSTTFN ALTAAGAESA NYPFCTIEPN VGVVVVPDPR LDALSAIVNP
QRVLPTTMEF LDIAGLVAGA SKGEGLGNQF LGHIRQVDAI VHLVRCFEDD DITHVANSID
PLRDIEIIDT ELILADMASA EKRYNSVVKK AKSGDKESKI QADALEKVIA GFNAGKPMRN
LDLSKEEQAT LAELFFLTNK PVLYLCNVSE SLVAAAQTPG SHALVDQVRE HAKGEGAEVV
AVCGSIEAEI AELEGDEKAA FLEDLGLHES GLDRLIQAAY RLLGLQTYFT AGVKEVRAWT
VKQGATAPEA AGVIHTDFQK GFIRAEVTSY DDFIACKGEA GAKEKGKLRL EGKEYRVADG
DVMHFRFNV
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