Gene Mmc1_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0815 
Symbol 
ID4480851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1018912 
End bp1019199 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content58% 
IMG OID639721558 
Product50S ribosomal protein L28P 
Protein accessionYP_864740 
Protein GI117924123 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00548085 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGCA AAAGAACGCT GGGTGGAAAA GCCCCCCAGG CTGGTAACAA AGTATCCCAC 
TCCCAACGCA AAACCCGTCG TCAGTGGATG CCTAATATTC AGACCAAAGC CCTTTGGAGC
ATCACCCTGG GCCAATCTGT CAAGGTCACC ATCTCCACCA GCGCCCTGCG CTCTGTGGAT
AACGCCGGTG GGCTGGACAA CTACCTGCTT AAAATTCTGC CCTCCGAACT GACCCCCTCC
ATGCGTCGCG TGGCCCGTCA GATCCGTGAG CGCAAAGCCG CTGCCTGA
 
Protein sequence
MARKRTLGGK APQAGNKVSH SQRKTRRQWM PNIQTKALWS ITLGQSVKVT ISTSALRSVD 
NAGGLDNYLL KILPSELTPS MRRVARQIRE RKAAA