| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0782 |
|---|
| Symbol | |
|---|
| ID | 4481071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 977826 |
|---|
| End bp | 978635 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639721526 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_864709 |
|---|
| Protein GI | 117924092 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.211491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCAG GTATTTGTCG TTGGATTGGC TGCCTCAGTA CGGTCATTTT CCTGGTTGCT
CTGGCAGAGC CTGCCATCGC ACAGGCTGAA TCGCGCTTGC AAACGATTCA GGCGCGCCAA
ACGGTGCGGG TTTGCATCTG GCCCGGTTAT TTTTCGATTA CCTATCGTAA TCCTCGCAGC
CAACAATTAG AGGGGATTGA TATTGATTTG GCCCACGCCT TTGCCGCAGA TCTAGGGGTA
ACGGTCGAAT TTATAGACAG TTCATTTTCA AAATTGAAAG AAAACCTCAC GCAGGATCGG
TGTGATATTG CGATGCATGG CGTGGGTGTG CGGGCCGACC GGGCAGAGTT TATGGATTTT
TCAGCACCCT ATCTGCGCAG CGGCATTTAC GCGGTGGTAG ATAAAAATCA CTTTGCGATC
CAAGCGTGGC AGGATATTGA TCGTAAGGGT CACATTATTG TGGTGCAAAA AGGCACTTAT
ATGGAACCGG TGATGCGGAG TTATCTGCAC CAAGGCACGC TCACCGTGGT CGACACCTTT
AAGGCCCGTG AGCAGGAGGT TGAAGCCGGT CGAGCCGATG TGTTTATGAC CGACTACCCT
TATGGCCGCC GCATGGCGCT GCTCAGTAGT TGGGCGAAGC TATTAACCCC CCCGCAGGTT
TTGGCCCCCA CCGATTATGC CTATGCCGTT CCCAAGGGCG AGCCCGAGTG GTTGGCGCGG
GTTAATGGTT TTGTTCGCCA GATCAAGAGG GATGGTCGGT TAAAACGTTT TGCAGAAAAG
AACGGTTTGA TGCCCATTGT GCTCGAATGA
|
|---|
| Protein sequence | MLSGICRWIG CLSTVIFLVA LAEPAIAQAE SRLQTIQARQ TVRVCIWPGY FSITYRNPRS
QQLEGIDIDL AHAFAADLGV TVEFIDSSFS KLKENLTQDR CDIAMHGVGV RADRAEFMDF
SAPYLRSGIY AVVDKNHFAI QAWQDIDRKG HIIVVQKGTY MEPVMRSYLH QGTLTVVDTF
KAREQEVEAG RADVFMTDYP YGRRMALLSS WAKLLTPPQV LAPTDYAYAV PKGEPEWLAR
VNGFVRQIKR DGRLKRFAEK NGLMPIVLE
|
|---|
| |