Gene Mmc1_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0757 
Symbol 
ID4480551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp935901 
End bp937310 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content59% 
IMG OID639721501 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_864684 
Protein GI117924067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG CACACGGCAT CACTCCAGCG TTGTTGGAAC AGACACTGAG CGCAACCCGC 
GTGGATGCTC AGGATGGTAC CCTGCCAGAG GTTTTTCATA GCCTCTCCAG TGATACCCGC
AGCCTGCAAC CTGGGGCACT ATTTGTGGCC CTTTCCGGTC CCAACCATGA TGCCAATCTC
TATGTACAGC AAGCCGTCAC GGCAGGGGCA TCGGGCATTT TATGCAGCCG CCCCCCCGCG
CAGTCGCTGC CCATTCCGCT GTGGGTGGTG ACCGATCCCC TGGCCGCCAT GACCCAACTG
GCGCGGGCTT GGCGTGCACA CTTATCGGCC AAAACCATTG GTATAACGGG ATCTTCCGGC
AAGACCACGG TTAAAGAGAT GCTGGGATTG ATCGTCAGCA GCCGCTACCG CACCGGGATT
ACCCGAGGCA ACCTTAATAA CCATATTGGT TTACCCCTGA CCCTGCTCAA CTGCCCCAGC
GACCGCACCC ATTTGGTGTT GGAAATGGGC ATGAGCGCCC CCGGCGAGAT CGCCCATCTG
GCCGAGCTCG CCCAACCCCA GATTGGCATT GTCACCAACA TTCTGGCGGC CCATGTGGCC
GGTTTTGGTG GGGGGAATCT GGTTTCGGCC CTGCGGGGCA TTGCCCATGC CAAAGGGGAG
CTGTTGCAGG CCCTGCCCCA TGATGGCTTG GCGGTATTGC CCGCCATAGA TCCCCACCTG
GCGCTTCTAC AAAGCCTGAC CGGTTGCGCT ATCCTGAGCT TTGGGCCACA AAGCAGCGGT
GCCGATGTGG TTTTTACGCC ACCAAGCTAT GGGGATGACG GCATGCTGAG CACCCTCATC
TTACCCAATG GCGAACGGTT TGCACTAAAC TTGCCCGGTT TTGGTCCCCA TCTGTGGCTC
AACGCGGTGG CCGCCTGTGC CGCTGCCTAT GGGCTGGGTT TGGATGCCGC CGCGATGCAG
GAGGGACTTA GCCGTTTTAA ACTCCAAAAA GGCCGAGGCA GCGTGGAGCA TGGCCAAGTA
GGATGTCGCA TCCTCAATGA TACCTATAAT GCCAATGTAG GGGCGATGCG TGTGGCCCTG
GAGGCCTTGT CGCACATGGC CCCTGCGCCC CAACGGATTG CGGTTTTGGG AGATATGCTG
GAGTTGGGGG AAGCCGCCGA TACGCTACAT GCCGAGTTGG CCCAAACCAT TCTGGCCTTA
GGCATTCAAC GGATATTTTT GGCCGGGCCG CATATGGCCG CGCTCTATCA GGCGCTACAG
AGCAGCCCCG GTTTGCAGCT GTTTCATTAC GCTGACCCTG TAGCATTGGC GAAGGATCTG
TCACACTATG TTGGTCATGG CGATGCGGTG TTGGTCAAGG GCTCACGGGG CATGCGCATG
GAGCGCGTGG TAGAAGCTCT GCACTCTTAA
 
Protein sequence
MSSAHGITPA LLEQTLSATR VDAQDGTLPE VFHSLSSDTR SLQPGALFVA LSGPNHDANL 
YVQQAVTAGA SGILCSRPPA QSLPIPLWVV TDPLAAMTQL ARAWRAHLSA KTIGITGSSG
KTTVKEMLGL IVSSRYRTGI TRGNLNNHIG LPLTLLNCPS DRTHLVLEMG MSAPGEIAHL
AELAQPQIGI VTNILAAHVA GFGGGNLVSA LRGIAHAKGE LLQALPHDGL AVLPAIDPHL
ALLQSLTGCA ILSFGPQSSG ADVVFTPPSY GDDGMLSTLI LPNGERFALN LPGFGPHLWL
NAVAACAAAY GLGLDAAAMQ EGLSRFKLQK GRGSVEHGQV GCRILNDTYN ANVGAMRVAL
EALSHMAPAP QRIAVLGDML ELGEAADTLH AELAQTILAL GIQRIFLAGP HMAALYQALQ
SSPGLQLFHY ADPVALAKDL SHYVGHGDAV LVKGSRGMRM ERVVEALHS