| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0756 |
|---|
| Symbol | |
|---|
| ID | 4480550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 934777 |
|---|
| End bp | 935865 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639721500 |
|---|
| Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
|---|
| Protein accession | YP_864683 |
|---|
| Protein GI | 117924066 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.184157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATC ATCTGCTCTA CCCCCATCAC GATCTCTGGT CCGTTCTTAA TCTGTTTCAA
TACGTCACCT TTAGAACCAT CATGGCGATT TTGACCGCCC TGTTGATCTC GTTTGTATTG
GGACCTTGGC TGATCCGCAA GTTACAATCG TTGCAGAGCA GCGGGCAGCC CATTCGCAAG
GATGGCCCGG AGCGCCATAT TATTGAAAAG GCCGGCACCC CCACCATGGG GGGTACGCTG
ATCTTGGTTG CGGTACTGGT GGCGACCCTG CTGTGGGCCA AATTGACCAA CCCCTTTATC
TGGTTGACCC TGGCGGCCAC CTTTGGTTTT GGTGCCATCG GTTTTTGGGA TGATGCGGAA
AAACTTATTC ACAAAAACCC CAAGGGGGTC CCCGGTCGTA CCCGTTTTCT GTTGCAGACC
CTCATTGTGC TGGCCATTGC CTTGGCCCTA AAATTTTATG TCAATCCCGA GGTGTTCGGT
AAGCTCGCCT TCCCAGTTTT CAAGGATCTG GTCATCGACC TAGGCATCTG GTTTTTCCCC
TTTGCGGTCA TTGTGATCGT GGGCTGTGGT AACGCGGTCA ACCTGACCGA TGGCTTGGAT
GGTCTGGCCA TTGGTCCGGC CATGTTTACC GCAGCGGCCT TTGCCTTAAT TTCACACGCG
GCAGGCCACT ATAACTTCGC CAACTACCTG GGCATTCCTT TTATTCCTGG GGCCAGCGAA
TTGGCTATTT TTTGTGGCGC TATTGTGGGC GCGGCGCTGG GTTTTCTCTG GTTTAACACC
TATCCGGCCC AAGTGTTTAT GGGCGACGTG GGCGCACTGG CATTAGGGGC CGCCCTGGGC
AGTGTGGCGC TCATGACCCA ACATGAATTG GTGTTGGCGA TTATTGGCGG CGTGTTTGTC
ATTGAAACCC TTTCAGTGAT CATTCAGGTG GCCTCTTTCA AGCTGATCGG CAAACGGGTG
TTTCGCATGG CCCCTTTGCA CCACCATTTT GAACTCAAAG GGTGGGCCGA ACCCAAAATC
ATTGTGCGCT TTTGGATCAT CTCCATCATT CTGGCCCTGG TTGGGCTGGC GACCTTAAAG
GTACGCTAA
|
|---|
| Protein sequence | MFYHLLYPHH DLWSVLNLFQ YVTFRTIMAI LTALLISFVL GPWLIRKLQS LQSSGQPIRK
DGPERHIIEK AGTPTMGGTL ILVAVLVATL LWAKLTNPFI WLTLAATFGF GAIGFWDDAE
KLIHKNPKGV PGRTRFLLQT LIVLAIALAL KFYVNPEVFG KLAFPVFKDL VIDLGIWFFP
FAVIVIVGCG NAVNLTDGLD GLAIGPAMFT AAAFALISHA AGHYNFANYL GIPFIPGASE
LAIFCGAIVG AALGFLWFNT YPAQVFMGDV GALALGAALG SVALMTQHEL VLAIIGGVFV
IETLSVIIQV ASFKLIGKRV FRMAPLHHHF ELKGWAEPKI IVRFWIISII LALVGLATLK
VR
|
|---|
| |