| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0730 |
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| Symbol | |
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| ID | 4481374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 898402 |
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| End bp | 899769 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639721474 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_864657 |
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| Protein GI | 117924040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.187305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.492023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG AACGTGAAGA AAAGCAACCT AACGAGGTCA AAAAAATCCC CACCGGCAAA
CGTCAGGAGC GTTTGTTAGC CCAATCTGTG GTATTGGAAG AGGCGGGTAT CTCTCGTCTG
TTAAAGATTG CCACCGTGGC CGTTGCAGGG GCTATTTTGA TTTTTTTCAT CTGGGCTAAT
TTTGCCAATA TGGAAGAGGT TGCACACACC ACCGGCGAGG TAGCCACAAC GGATACCATC
CAGTTTGCAC AGCATCTGGA AGGTGGCATC GTTGGGGAAA TTTTTATTGA AGAAGGGCAG
CGCGTTACCC AGGGACAGCC TCTTGCCCAG ATGAAATCGG AAGATGTGCT GGCAGAGTAT
AACCAAATGC ACGCTCGCGA GGCGATTTTA GCGCTACAGG TTGCCCAAAA GCGGGCCTTG
ATCAACAGCG AACCTATTGA TCTAAGCGGC ATTGAGCGCC CTCTTTTTGA CCATATGATT
GCGGAATCCG TCGATTTTTT GGATGCACAG CGCACCTCTT TGGCCAGCCA GCGTGAGGTT
ATTCTGATCC AGGTCAAGCA GAAAGAGATG AAGCTAAAAA AGCTGCTCAA CCAAGCCCAA
GCCAATCGTC AGCAAGTACA GTACTACAAT GAAGAGTTGG AGGTGCGTCG GCCCTTGACC
GAGCGCAAAC TCATGAGCCG CCTACAGACC CTCTCAGCCA TGCAGTCTCG GGAGAAAACC
CGGGCGGATA TGTTAGAGTC TGAAGGGGAT GTAGAAGTCA CCAAATTGGA GCTCGATGAA
AAATGGCAAA ATTTGCGTGA AACCGAGGAT AGTTTTTATC AAGATGCCAT GCGCGAGCTT
GATGGTGCCT ATTCGGAGCT CACGCAAATT CGCACCACCC TACCCCGGTT AAGGGATCGC
ATGACCCGCT TGGTGGTACG CTCGCCGGTT GATGGGGTTA TTAAAGAGAT TAAGGTCAAC
GGTGTCGGCA GTGTACTGGG TCCTGGTGGT GAAATCGCTG AAATTGTCCC CCTTGAGGAT
ACCAATAAAG TTGAGGTTAA AATTACCACG GTGGACATTG GTCACGTCGC GGTTGGTCAG
GATGTTACGG TGAAAGTGAG CACTTATGAT TATGCCCGTT ATGGTGGCAT TCAGGGGAAA
CTTATTGCCG TTTCACCCTC CACTTTTGTG GATGAAAACG GCAAGGACCC CTACTACCGG
GGCACCATTC AATTAGATCA GAATTACGTT GGAAGCGACC CAACCAAAAA TCTGCTTTTG
CCTGGCATGA CGGTGGAAGC GAGCATCCAT ACAGGTTCAA AAACCCTTAT GGAATATTTG
CTTAAACCCA TCTATGCCTC GGTTAATGAT TCGTTCCGCG AACGCTAA
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| Protein sequence | MNAEREEKQP NEVKKIPTGK RQERLLAQSV VLEEAGISRL LKIATVAVAG AILIFFIWAN
FANMEEVAHT TGEVATTDTI QFAQHLEGGI VGEIFIEEGQ RVTQGQPLAQ MKSEDVLAEY
NQMHAREAIL ALQVAQKRAL INSEPIDLSG IERPLFDHMI AESVDFLDAQ RTSLASQREV
ILIQVKQKEM KLKKLLNQAQ ANRQQVQYYN EELEVRRPLT ERKLMSRLQT LSAMQSREKT
RADMLESEGD VEVTKLELDE KWQNLRETED SFYQDAMREL DGAYSELTQI RTTLPRLRDR
MTRLVVRSPV DGVIKEIKVN GVGSVLGPGG EIAEIVPLED TNKVEVKITT VDIGHVAVGQ
DVTVKVSTYD YARYGGIQGK LIAVSPSTFV DENGKDPYYR GTIQLDQNYV GSDPTKNLLL
PGMTVEASIH TGSKTLMEYL LKPIYASVND SFRER
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