Gene Mmc1_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0724 
Symbol 
ID4481367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp870219 
End bp870770 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content56% 
IMG OID639721467 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_864651 
Protein GI117924034 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.64085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCC TGTTTCGGTA TCTGCCCTCT CCCCACTGTG ATGAGCGTCC GGTGGGGGAG 
GTGGTGGAGC TGCTGGTGGT ACATGCCATT AGCCTGCCCC CGGGTCAATT TGGGGGTGGC
TGGATTGACG ACCTGTTCAT GGGGGTGTTG GATGCCCAAG CTGACCCCTA TTTTGTTGGC
ATTGCATCGT TGCGGGTGGC CGCGCATTTT TTGATTGGTC GTGATGGCGG CATAACCCAA
TATGTACCGC TTAGTAAACG CGGCTGGCAT GCGGGTGAAA GTGTGTGGCA GGGCCGACCA
CGCTGCAATG ATTTTTCCAT CGGTGTTGAG TTGGAAGGGG ATGAAGAGCA CCCCTTTGCA
GCCATTCAAT ATCAACGTCT GGCCCAGTTA ACACGTACGT TACAGCAACG ACTGCCCCGT
TTGGTGGAGG TTGTAGGCCA CCAAGATATC GCCCCGGGTC GCAAGTGGGA TCCGGGTCGG
CAGTTTGACT GGCCAAGGTT TAGGGCCATG TTGCCCCACG TTGAACCCCT AGATCTGCCC
ATCATTGCAT AG
 
Protein sequence
MTSLFRYLPS PHCDERPVGE VVELLVVHAI SLPPGQFGGG WIDDLFMGVL DAQADPYFVG 
IASLRVAAHF LIGRDGGITQ YVPLSKRGWH AGESVWQGRP RCNDFSIGVE LEGDEEHPFA
AIQYQRLAQL TRTLQQRLPR LVEVVGHQDI APGRKWDPGR QFDWPRFRAM LPHVEPLDLP
IIA