| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0711 |
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| Symbol | |
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| ID | 4480557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 854137 |
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| End bp | 857478 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721454 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_864638 |
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| Protein GI | 117924021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.357595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC AGTTAAGCTC ATTATTACAG TTGGATGCCC AGCAATTGCA GCAGGCGTTA
CAGCAGGCCA TCGCCCAAGA TCCCGACCCT CAACAGGCCG CGCAAGATGT CACTGCATGG
TTATGTCGGG ATGCCCAGGA TGCCCAGAAA CAGTATTTAC TGGGTTGGCA AAAGTTCCAC
CAAGGGGATT TTAACGGGGC ACTCTATCTG GTGGAGCAGT CCATGGCGTG GGGGGCTGTT
TATCCCGATA TTCTGCGTTT AAAGGTACTG GTCTATATTG CGCTGGGGCA GGGTAAAAAG
GCTTTAGAAC AGTGTCAGTT GTTGAGCAAA TATCCCTTGC CAGCTGGCAT GTTAAACCTT
TTAACAGCCT ATGGTTATCT GGTGCTTAAC CAACTGGATT CCACCGAGGA CGCCGCCCGA
CAGGCACTGC TGCAAGCGCC GCGCTGGAGC CCTCCTTATG TGTTGATGCT ACAACTGAGC
GAGAAGCTGC AAAAACCACT ATTGACCCAA TACATCCAGG CCATGTTGCG GCATTTTTTG
CCCCATGTGG GGACGGTGCC TGCTACGGAA CCGGCGGATA CGCTGTTTTT TGATCAACAG
CAAGCTCGAC AGGTGGCCGC TCAGGCCCTG CTGGTTAACA CCCCGTATGG GGGGCGGGCA
CGGCAGCTCT GCGTGGTATT GGGGGGGGAG GGTGAGGAGC CTGGGCTGTT GGGCGTAAAA
GAGAGCGAAC TGCTGTCGCG CTGGAGTGAA AGCGCCTTGA GGATGCCGAG CCGCATTGAG
CCAGACTGGG ATAATCCCGC GCAAATAGAA CAAGGTTTTT GGGTGGTTAG GCAGCTCTTT
GCCGCGCAAC ATTTGCGGGA CAAGCGGGAA CAGGAAATCA CCCAGCGCAT GCTCGCGGTT
GCTCCACGGT GTGCGCCGGA CGAGCCTCCC CGGTTGCTCT TGATCTGTGC CCGTCAGCAT
CCCAGTTATG CGGGGGTCGT GGGGCTGGTG CAGATGCTCG AAGCGCAGGC TCAGGTGGTG
TTGTGTGACG AGGCCAGTGA CTATGCGCAA CTGGATGTGT GCCATATCCT AGAGCAGATA
AACCAGTGGC AACCCCACGT CGTGGTGTGG TGGGAGGGTC CGGTGCTGGC GTTGCCCAGT
CGCTTGATTA TCCCTATGGA AAAGCAGCAA AGCTGGATAG CTGCCCAGCG TACCCAGCAG
CCAGAGCAGG TGGTGCTGCT GCCCGCCCAG GCCCTACAGC CGCAAGGGGG GGAGGGCTAC
CAGGGTTTGC ACCCTGAGCA GACAGAGGTG CTGCAACGCT TTGCCCAGTG GCTGCTCAGC
CAAGTGCCGA GCGGTGAGCA GGAGGCGGCG GTTGCCACCC ATGGGGTGAT GCAGGCTGAG
CATCAACAAC AATTGGCGGT CAGTTACCAA ACCCTGTTGG CAGGGCAGGT AGAGCAAGCC
GTAGGCGAGT TAGAGGCGCT GCTACGGCTC TATCCTCAGC AAGGCGAGAT CCAAGCCATT
TTGGCCAATC TGGCGTTGGC GCAAAAAAAA CCCGAAGAGG CGCGCAATCG TCTATTGCAG
GCGGTAGCGG CCAACCCCCG GCATGAACTC TGTTTGGAGT TGCTGGCGCA AGCCTATGTG
CAGATGGGGC AGATTACCGA GGCCGAGGCG GTGCTAAAGC GGTTGTTGGC CTTTGCGCCA
GACCATCAGG CGGGGCTGTT GGCGTTGGCC AATCTCTATC TGGACCATGT TAAACCGGTA
CCGGAGGTTT GTTTGGCCCA CCTTAATCAT CTGCTGCGCT TGAACCGTCA AGAACCAAGT
ATTTATGCTG CATTGGTCTG TTATTGGGCC ATGACAGAAG ATGACGTGCA GAAAAATTGG
GCCATGCAGA TGATGAATCA TTTTGTGCAT GACCCGTCCA AGCGGGTGCA TGTGGCGACT
GAAGATCTGT TTTGTGTCAC CCCTGAACTG GCGCTGGCAC AGGCGCACAA GGGGTTGTTG
GTCAAGCATA CGGCGGCAAT CGCTTTGCCA CAGATCTGCT ATTACCAGGG CGAAGCGCTG
GATGACCATG GTCTGGAAAA TTTGATCGCC ATACAAGAAA AAGTGAGCCA CTATTTTTCG
GTGCCTTTAA TCCGGCGGCC CACTCAAGTG CTGTTTGATC CGGCCAATCC TGAGCAGGTT
GCCACGGCAA AACAGTATGC GGAGCTGTTT GATCTGATCA ATAAAGCACG GCAAAAGCGC
GCCAATGCCA TTTTGGAGCG CTACCGACAG ACCCCGCCGG GGCCCATGCT CAATGGCCGG
GTGCGGGTGT TGGCAACCGC CTCGCGTATG ACCACGGTGA TGCGCTACAG TTCGGCTGGC
TTGATCCAGG CGTTCAAAAA AATTGGCTGT GATGTGCGCT TTTTGATGGG GCGCAACAAC
CGGGAAGATG CCGACGCCCT GGATATTATG ACCGCTCACC ACGACTTTGA TCCCCATTTG
GTGGTGAGCA TTAATTGGGC GGTCAGTGGT TATTATCATC CAGAGCGGTG GAACGCCGTG
TGGTACCAAG ACCCCATGCC CGATATTAAT AAGGGTAAAA AACAGCCCTG GCGAGAGCGG
GATTTGGTCT ATTCGGTCCT GCCTTATCTG GATGAAATGA TCATAAAGAG CGGCTATAAA
AACCCCAGGC GGCAAAGTTT TTGTGTGGAC CTGGATCTCT ACAAGCGGCA CAAATCTGTT
GAGAAGCGGC ATAAAATCAT TTTTGTTGGC AGCGCATATG CGCGGCATTT GACGCCGACT
TCGGATGCCG AGCGGGGTTT GGTTGAGCAG TTTGTACAAG CCAGTGAGGC GGGCGAGGCG
CTCTCGCCCG CGCAGATTAA CCAGATGGCA GAGCAGGTCC ATTTAAGTCC GCTGTTTATC
CGTGAGTATG TCTATCCCTT TGCGGTGCGG GATCTAAGCG TACGGTGGCT GTGTGAGCTG
GCCCCAGAAC TACCCTATGC GGTAGAGGTG TATGGTTATG GTTGGGAAAA TGATCCCGTG
GTGGCTCCCT ATTATAAAGG GGTCGCCCAA CAAGGCATGC ACCTGGTGCA GATCTATAAT
GAGGCGAAAT ATGCGCTCTC TCCCCAAGCG CACTTGGTGA ACAGTCAACG CACGGTTGAG
ATTGCCGCTT GCGGTGCGAT ACCTGTATTA AATGATCATC GGCAGTTTGC TGACCTCCCC
CACTGGGATG AGCATATGCT TTTTTATAAG ACTAAAGCGG ATATGCGACA GCTTTTTAGC
CAAAGCCCGC TGCATGATCC CTATGAAATG GCCCTTTCCT ACAGTTACGA GAGCTTCGCC
CAGCGGATTT TAGAGGATGC CGGGCTCGCT TCAGTGCGTT GA
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| Protein sequence | MNKQLSSLLQ LDAQQLQQAL QQAIAQDPDP QQAAQDVTAW LCRDAQDAQK QYLLGWQKFH
QGDFNGALYL VEQSMAWGAV YPDILRLKVL VYIALGQGKK ALEQCQLLSK YPLPAGMLNL
LTAYGYLVLN QLDSTEDAAR QALLQAPRWS PPYVLMLQLS EKLQKPLLTQ YIQAMLRHFL
PHVGTVPATE PADTLFFDQQ QARQVAAQAL LVNTPYGGRA RQLCVVLGGE GEEPGLLGVK
ESELLSRWSE SALRMPSRIE PDWDNPAQIE QGFWVVRQLF AAQHLRDKRE QEITQRMLAV
APRCAPDEPP RLLLICARQH PSYAGVVGLV QMLEAQAQVV LCDEASDYAQ LDVCHILEQI
NQWQPHVVVW WEGPVLALPS RLIIPMEKQQ SWIAAQRTQQ PEQVVLLPAQ ALQPQGGEGY
QGLHPEQTEV LQRFAQWLLS QVPSGEQEAA VATHGVMQAE HQQQLAVSYQ TLLAGQVEQA
VGELEALLRL YPQQGEIQAI LANLALAQKK PEEARNRLLQ AVAANPRHEL CLELLAQAYV
QMGQITEAEA VLKRLLAFAP DHQAGLLALA NLYLDHVKPV PEVCLAHLNH LLRLNRQEPS
IYAALVCYWA MTEDDVQKNW AMQMMNHFVH DPSKRVHVAT EDLFCVTPEL ALAQAHKGLL
VKHTAAIALP QICYYQGEAL DDHGLENLIA IQEKVSHYFS VPLIRRPTQV LFDPANPEQV
ATAKQYAELF DLINKARQKR ANAILERYRQ TPPGPMLNGR VRVLATASRM TTVMRYSSAG
LIQAFKKIGC DVRFLMGRNN REDADALDIM TAHHDFDPHL VVSINWAVSG YYHPERWNAV
WYQDPMPDIN KGKKQPWRER DLVYSVLPYL DEMIIKSGYK NPRRQSFCVD LDLYKRHKSV
EKRHKIIFVG SAYARHLTPT SDAERGLVEQ FVQASEAGEA LSPAQINQMA EQVHLSPLFI
REYVYPFAVR DLSVRWLCEL APELPYAVEV YGYGWENDPV VAPYYKGVAQ QGMHLVQIYN
EAKYALSPQA HLVNSQRTVE IAACGAIPVL NDHRQFADLP HWDEHMLFYK TKADMRQLFS
QSPLHDPYEM ALSYSYESFA QRILEDAGLA SVR
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