| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0707 |
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| Symbol | |
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| ID | 4480553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 848495 |
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| End bp | 849943 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721450 |
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| Product | glutamate synthase (NADH) small subunit |
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| Protein accession | YP_864634 |
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| Protein GI | 117924017 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.153272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGA TTACAGGGTT CATGGAGTTC GAACGTGAGC TGCCTGAAAA GCGGCCCGTT
GCCGAGCGCA TTAAAGACAG CAAAGAGCTT TATAAGGATT TTCCAGAGTC CGCTTTGCGT
ATCCAGGCTG CCCGCTGTAT GGATTGTGGC ATTCCCTTTT GCCATAGCGG TTGTACCCTG
TGTAACCTGA TTCCCCAGTG GAACGATCTG GTCTATCGGG AGCGTTGGGA GGATGCCAGT
CAAGCACTGC ACCGCACCAA TAACTTTCCG GAGTTCACGG GTCGTATCTG CCCTGCTCTG
TGCGAAGCCA GTTGTGTGGT GGGCATCAAT GGCGAAGCGG TGGCGATTCG TGAAATTGAA
AAAACCGTGG CTGAAAAGGG TTGGCAGGAG GGTTATATCA AGCCCCTCAA GCCCTTGAGT
CTGACCGGCA AACGGGTGGC GGTGATCGGT TCTGGCCCGG CGGGCATGGC CTGTGCCCAG
CAGCTTACGC GGGTGGGCCA CAGTGTGACG TTGTATGAAA AAAATGAGTC GGTGGGTGGT
TTGTTGCGGT TTGGTATCCC TGATTTCAAG CTGGAAAAAG AGGTGGTGGA ACGCCGCGTC
AACCAGATGA AAGAAGAGGG TTTGACCATT AAGACGGGTG TGCATGTGGG GGTGGATCTC
TCCATTGAGC AGCTACGCCA AGAGAGTGAT GCCATTGTGC TCACCGGTGG GGCTGAACAG
CCCCGCAATC TGCCCATTCA AGGACGGGAA TTTAAGGGCA TTCATTTTGC CATGTCCTTT
TTGGCCCAGC AAAACCGCCG GGTAGCCGGA TCAAAGATTG CGCCGGATGA GGTGATCCAT
GCGGCGGGCA AACGGGTGGT GGTGATCGGT GGTGGGGATA CCGGTTCTGA CTGTGTGGGG
ACCTCAAACC GTCATGGTGC GGTGAGCGTG ACCCAACTGG AACTGCTGCC CAAACCGCCA
CGGGACCGTG CCGATGAGAC CCCTTGGCCG ACCTGGCCGC ATATGTTGCG CACCAGCACC
TCTCACGAGG AGGGGTGTGA CCGTATGTGG TCCATTTTGA CCAAATATTT TGAGGGGGAT
GAGCAAGGCA ACGTTAAGCG CCTGCACTGT GTGAAGCTGC GTTGGATCGA GCAGGAGGAT
GGCAGCCGTC CACAGATGGA GGAGATCGCG GGCAGCGAGT TTGTGCTGGA AGCGGATCTG
GTGTTGCTGG CGATGGGCTT TTTGGGTCCG GTTAAAACCG GCTTGCTGGA TGAGTTGGGT
GTGGCGCTGG ATGCCCGTGG TAACGTGAAG GTGGATCATC AGTTCCAGAC CAGTGTTGCG
GGTGTTTTTG CGGCAGGGGA TATGGCGACG GGTCAATCCT TGGTGCTCAA GTGCATTGAT
AGCGGGCGCA AGGCTGCCCG TGGTGTGGAC GCCTACCTGC GGGGCGGGGA ATCCATTCTG
GAGCCTTGA
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| Protein sequence | MGKITGFMEF ERELPEKRPV AERIKDSKEL YKDFPESALR IQAARCMDCG IPFCHSGCTL
CNLIPQWNDL VYRERWEDAS QALHRTNNFP EFTGRICPAL CEASCVVGIN GEAVAIREIE
KTVAEKGWQE GYIKPLKPLS LTGKRVAVIG SGPAGMACAQ QLTRVGHSVT LYEKNESVGG
LLRFGIPDFK LEKEVVERRV NQMKEEGLTI KTGVHVGVDL SIEQLRQESD AIVLTGGAEQ
PRNLPIQGRE FKGIHFAMSF LAQQNRRVAG SKIAPDEVIH AAGKRVVVIG GGDTGSDCVG
TSNRHGAVSV TQLELLPKPP RDRADETPWP TWPHMLRTST SHEEGCDRMW SILTKYFEGD
EQGNVKRLHC VKLRWIEQED GSRPQMEEIA GSEFVLEADL VLLAMGFLGP VKTGLLDELG
VALDARGNVK VDHQFQTSVA GVFAAGDMAT GQSLVLKCID SGRKAARGVD AYLRGGESIL
EP
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