Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0698 |
Symbol | |
ID | 4481271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 834109 |
End bp | 835314 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639721441 |
Product | L-aspartate aminotransferase |
Protein accession | YP_864625 |
Protein GI | 117924008 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00325114 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.844303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTT TGTCAAATCG TGTTGCCAAA GTAAAACCCT CAGCCACACT GGCGGTTACC GCCAAGGCCA AGGAGTTAAA GGCAGCCGGA CGTGACGTCA TCGGGCTGGG TTCAGGCGAG CCCGACTTTG ACACGCCCGA TCACATTAAA CAAGCCGCCA TTGACGCCCT GAACGCTGGC TACACCAAAT ATGTGGCCGT AGCGGGTACG CCAGAGCTGC GTCAGGCCAT CGCCGATAAA TATAAGCGCG AGACCGGCCT GGACTACTCC GCCGAGCAGA CCGTGGTGAC GGTTGGTGGC AAACAGGCGT TCTTCAACTT GGCCCAAGCC ACCCTTAACA GTGGGGATGA GGTTATTATT CCTGCGCCTT ATTGGGTCTC TTATCCTGAC ATGACCCTGC TGGCGGATGG CACCCCTGTG ATTGTGGATA CCCAGGAGAG CCATGGTTTT AAGATCACAC CTGCTGAGTT AGAGGCGGCC ATTACCCCGC GCACCAAGTT TGTGGTGCTC AATTCGCCCT CCAACCCTAC GGGTAACGCC TACAGCATTG CCGAGCTGCA CGCTCTGGCC GAGGTGCTGC GCAAGCACCC CCATGTATGG GTGATCAGCG ACGATATCTA TGAAAAGATC ATCTATGATG GCTTTGAGTT TGCCACCATG GTTAAGGTTG CGCCCGATTT GCAAGATCGC ACCGTTATTC TGAATGGCGT CGCCAAGGCT TACTCCATGA CCGGTTGGCG TATTGGCTAT GCGGTGGGAC CGCTGGATGT GATTAAGGCC ATGACGAAAA TTCAGGGACA GAGCACCTCC AACGCCACCT CTTTTGCCAT GAAGGGCGCC TTAGAGGCCA TCACCGGCCC CCAGGATTGC GTTGAGCCCA TGGTCAAGGC ATTCAAGGAG CGCCGTGACT ATGTGGTTGC CCGTTTGAAC GCCATGCCCG GCATTAGCTG TCTGACTCCT GAGGGTGCTT TTTACGTCTA CCCCAACGTC GCGGGCTTGG TGGGTAAAAA AGCCCCCGAT GGCAGCGACC TGAAAGATAG CGTGGATCTG GCCTCTTACA TGTTAGAAGC CGAGGGGGTC GCGGTGGTCC CAGGGGTTGC TTTTGGTCTG GATCCTTACT TGCGTCTCTC CTACGCCACC AGCATGGAAG ATCTGATTAA GGCCATGGAC CGCATTGAAA AGATTGCGCA GCAGCTCGCC GGTTAA
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Protein sequence | MGILSNRVAK VKPSATLAVT AKAKELKAAG RDVIGLGSGE PDFDTPDHIK QAAIDALNAG YTKYVAVAGT PELRQAIADK YKRETGLDYS AEQTVVTVGG KQAFFNLAQA TLNSGDEVII PAPYWVSYPD MTLLADGTPV IVDTQESHGF KITPAELEAA ITPRTKFVVL NSPSNPTGNA YSIAELHALA EVLRKHPHVW VISDDIYEKI IYDGFEFATM VKVAPDLQDR TVILNGVAKA YSMTGWRIGY AVGPLDVIKA MTKIQGQSTS NATSFAMKGA LEAITGPQDC VEPMVKAFKE RRDYVVARLN AMPGISCLTP EGAFYVYPNV AGLVGKKAPD GSDLKDSVDL ASYMLEAEGV AVVPGVAFGL DPYLRLSYAT SMEDLIKAMD RIEKIAQQLA G
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